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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-PK
(Reference Set) 		Cotton-Graimondii_physical
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Correspondences
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Maps c1 Gr_Chr02
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c1
Map Start: 0 cM
Map Stop: 147.3 cM
Features by Type:
76 Marker
13 QTL
89 Total

Map Features

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Items 76 to 89 of 89.       Previous | of 4
Cotton - PK - c1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig28A09 Marker 43.8 Cotton - HDC - 19 Unig28A09 Marker 88.7 (cM) Automated name-based View Maps
Cotton - PK - D08 Unig28A09 Marker 136.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 Unig28A09 Marker 43.6 (cM) Automated name-based View Maps
EL01.1 QTL 116.2 - 147.2 No other positions
FF01.1 QTL 125.8 - 147.2 No other positions
FF01.3 QTL 19.7 - 55.9 No other positions
FL01.2(HVsl2.5) QTL 147.2 - 147.3 No other positions
FS01.2 QTL 113.7 - 138.4 No other positions
MIC01.1 QTL 128.5 - 130.9 No other positions
OP01.1(B) QTL 119.4 - 132.4 No other positions
EL01.2 QTL 87 - 102 No other positions
FF01.2 QTL 74.5 - 116.2 No other positions
FL01.1(HVsl2.5,HVuhm) QTL 55.9 - 126 Cotton - PK - c17 FL17.1(HVsl2.5,HVuhm) QTL 0 - 22.7 (cM) Automated name-based View Maps
Cotton - PK - c7 FL07.1(HVsl2.5,HVuhm) QTL 175.2 - 175.3 (cM) Automated name-based View Maps
Cotton - PK - A02 FLA02.1(HVsl2.5,HVuhm) QTL 15 - 46.3 (cM) Automated name-based View Maps
Cotton - PK - c12 FL12.1(HVsl2.5,HVuhm) QTL 17.6 - 52.8 (cM) Automated name-based View Maps
FS01.1 QTL 95.2 - 102 No other positions
FU01.1(HVlnCV) QTL 125.8 - 146.5 No other positions
MLTD01.1 QTL 120.9 - 123.6 No other positions