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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-PK
(Reference Set) 		Cotton-Graimondii_physical
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Maps A02 Gr_Chr04
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A02
Map Start: 0 cM
Map Stop: 177.6 cM
Features by Type:
102 Marker
16 QTL
118 Total

Map Features

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Items 101 to 118 of 118.       Previous | of 5
Cotton - PK - A02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig22C03 Marker 86.5 Cotton - HDC - 8 Unig22C03 Marker 100.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig22C03 Marker Cotton 39,219,981 - 39,220,619 (bp) Automated name-based View Maps
Unig24D03 Marker 68.4 Cotton - Graimondii_physical - Gr_Chr04 Unig24D03 Marker Cotton 47,606,125 - 47,606,770 (bp) Automated name-based View Maps
Cotton - HDC - 8 Unig24D03 Marker 87.8 (cM) Automated name-based View Maps
Chl-aA02.1(WW) QTL 27.2 - 50.5 No other positions
Chl-bA02.1(WW) QTL 27.2 - 47.6 No other positions
ELA02.2 QTL 32 - 46.4 No other positions
FCA02.1 QTL 65.7 - 77.8 No other positions
FLA02.15(HVuhm) QTL 26.3 - 52.3 No other positions
FSA02.1 QTL 99.1 - 167.3 No other positions
HIA02.1(BT) QTL 43.2 - 59.3 No other positions
SCA02.1(BT) QTL 43.2 - 58.6 No other positions
BNA02.1(WW) QTL 43.2 - 58 No other positions
Chl-aA02.2(RV) QTL 48 - 79.1 No other positions
ELA02.1(FE) QTL 25.4 - 45.2 No other positions
ELA02.3(ELONG) QTL 57.3 - 84.1 No other positions
FLA02.1(HVsl2.5,HVuhm) QTL 15 - 46.3 Cotton - PK - c7 FL07.1(HVsl2.5,HVuhm) QTL 175.2 - 175.3 (cM) Automated name-based View Maps
Cotton - PK - c17 FL17.1(HVsl2.5,HVuhm) QTL 0 - 22.7 (cM) Automated name-based View Maps
Cotton - PK - c1 FL01.1(HVsl2.5,HVuhm) QTL 55.9 - 126 (cM) Automated name-based View Maps
Cotton - PK - c12 FL12.1(HVsl2.5,HVuhm) QTL 17.6 - 52.8 (cM) Automated name-based View Maps
FLA02.2 QTL 76.3 - 87.5 No other positions
FSA02.2 QTL 119 - 137.2 No other positions
OPA02.1(BT) QTL 31.1 - 50.5 No other positions