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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set) 		Cotton-Graimondii_physical
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Maps c5 Gr_Chr09
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Marker Cotton
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 108.92 cM
Features by Type:
43 Marker
2 QTL
45 Total

Map Features

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Items 26 to 45 of 45.       Previous | of 2
Cotton - Guazuncho2xVH8-RIL - c5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E35M52-M107.5 Marker 80.56 No other positions
E35M48-M196.8 Marker 83.32 No other positions
JESPR065b Marker 87.45 Cotton - Guazuncho2xVH8-RIL - c21 JESPR065a Marker 6.62 (cM) Automated name-based View Maps
Cotton - TH - 5 JESPR065 Marker 166.5 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR065 Marker 59.8 (cM) Automated name-based View Maps
Cotton - GVc - 22 JESPR065 Marker 73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 JESPR065 Marker 287.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR065 Marker 140.19 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR065 Marker 55.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR065c Marker 32.03 (cM) Automated name-based View Maps
Cotton - GVc - 21 JESPR065 Marker 17.7 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR065 Marker 27.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 JESPR065d Marker 59.76 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR065 Marker 108.6 (cM) Automated name-based View Maps
E43M54-M316.4 Marker 89.09 Cotton - GVc - 5 E43M54-M316.4 Marker 106.9 (cM) Automated name-based View Maps
CIR185 Marker 92.05 Cotton - Guazuncho2xVH8-BC1 - c5 CIR185 Marker 290.9 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR185 Marker 153.79 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR185 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR185 Marker Cotton 6,070,567 - 6,070,757 (bp) Automated name-based View Maps
Cotton - E3 - 5 CIR185 Marker 176.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR185 Marker 113.6 (cM) Automated name-based View Maps
BNL4030b Marker 92.78 Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 57.5 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 124.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
E31M53-M116.3 Marker 93.92 Cotton - GVc - 5 E31M53-M116.3 Marker 112.1 (cM) Automated name-based View Maps
NAU2121 Marker 97.7 Cotton - TH - 5 NAU2121 Marker 188.6 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU2121 Marker 124.2 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU2121 Marker 177.66 (cM) Automated name-based View Maps
CIR253 Marker 98.9 Cotton - TH - 5 CIR253 Marker 174.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR253b Marker 72.76 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR253 Marker 316.5 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR253 Marker 167.8 (cM) Automated name-based View Maps
Cotton - CH - 22 CIR253 Marker 108.7 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR253 Marker 19.34 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR253 Marker 86.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR253 Marker 163.98 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR253 Marker 122.1 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR253 Marker 49.6 (cM) Automated name-based View Maps
E31M48-M87.8 Marker 102.84 No other positions
CIR328 Marker 108.92 Cotton - T3 - 5 CIR328 Marker 199.19 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR328 Marker 138.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR328 Marker 337.8 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR328 Marker 27.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR328 Marker Cotton 611,120 - 611,614 (bp) Automated name-based View Maps
NAU1137 Marker 0.31 Cotton - GVc - 5 NAU1137 Marker 22.5 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1137 Marker 0.6 (cM) Automated name-based View Maps
Cotton - CH - 5 NAU1137 Marker 224.5 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU1137 Marker 29.1 (cM) Automated name-based View Maps
NAU1223 Marker 15.12 Cotton - TH - 5 NAU1223 Marker 54.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1223 Marker 80.9 (cM) Automated name-based View Maps
E43M53-M308.6 Marker 75.57 Cotton - GVc - 5 E43M53-M308.6 Marker 91 (cM) Automated name-based View Maps
E32M50-M186.8 Marker 75.62 No other positions
E32M49-M517.0 Marker 75.81 No other positions
CIR301 Marker 76.97 Cotton - GVc - 5 CIR301 Marker 91.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR301 Marker 253.1 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR301 Marker 83.5 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR301 Marker 189.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR301 Marker Cotton 11,541,386 - 11,541,818 (bp) Automated name-based View Maps
Cotton - T3 - 5 CIR301 Marker 125.2 (cM) Automated name-based View Maps
E36M47-M158.5 Marker 79.89 No other positions
eQTL_22_dpa_c5 QTL 21 - 23 No other positions
eQTL_10_dpa_c5 QTL 21 - 29 No other positions