CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Cotton-Guazuncho2xVH8-BC1
Min.
Correspondences
Align Vertically
Stack
Maps c25 c25
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c25
Map Start: 0 cM
Map Stop: 159.9 cM
Features by Type:
86 Marker
11 QTL
97 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 76 to 97 of 97.       Previous | of 4
Cotton - PK - c25
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Coau3L05 Marker 116.2 Cotton - Graimondii_physical - Gr_Chr10 Coau3L05 Marker Cotton 57,711,064 - 57,711,720 (bp) Automated name-based View Maps
Cotton - PK - c6 Coau3L05 Marker 80.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 Coau3L05 Marker 46.4 (cM) Automated name-based View Maps
Cotton - PK - c23 coau3L05 Marker 11.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 Coau3L05 Marker 39.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 Coau3L05 Marker 11.6 (cM) Automated name-based View Maps
G1099 Marker 116.2 Cotton - Guazuncho2xVH8-BC1 - c6 G1099 Marker 216.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 G1099 Marker 141.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 G1099 Marker Cotton 57,458,624 - 57,459,719 (bp) Automated name-based View Maps
Cotton - PK - c6 G1099 Marker 80.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 G1099 Marker 102.9 (cM) Automated name-based View Maps
Cotton - HDC - 25 G1099 Marker 39.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 G1099 Marker 46.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 G1099 Marker 115.7 (cM) Automated name-based View Maps
G1262 Marker 77.5 Cotton - Graimondii_physical - Gr_Chr10 G1262 Marker Cotton 11,065,102 - 11,066,141 (bp) Automated name-based View Maps
Cotton - HDC - 25 G1262 Marker 89.6 (cM) Automated name-based View Maps
Gafb08C24 Marker 74.8 Cotton - HDC - 25 Gafb08C24 Marker 101.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gafb08C24 Marker 105.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gafb08C24 Marker 92.8 (cM) Automated name-based View Maps
Cotton - PK - c5 Gafb08C24 Marker 10.6 (cM) Automated name-based View Maps
Gafb24D05 Marker 106 Cotton - HDC - 25 Gafb24D05 Marker 64.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gafb24D05 Marker Cotton 43,716,752 - 43,717,601 (bp) Automated name-based View Maps
Gate1CE02 Marker 46.1 Cotton - HDC - 25 Gate1CE02 Marker 121.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate1CE02 Marker Cotton 4,733,888 - 4,734,344 (bp) Automated name-based View Maps
Gate2CA07 Marker 93.8 Cotton - HDC - 25 Gate2CA07 Marker 78.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate2CA07 Marker Cotton 34,540,846 - 34,541,595 (bp) Automated name-based View Maps
Gate2CG09 Marker 89.4 Cotton - HDC - 25 Gate2CG09 Marker 79.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate2CG09 Marker Cotton 25,602,619 - 25,603,337 (bp) Automated name-based View Maps
Gate4BB01 Marker 43.1 Cotton - HDC - 11 Gate4BB01 Marker 132.9 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate4BB01 Marker 113.2 (cM) Automated name-based View Maps
Cotton - PK - c6 Gate4BB01 Marker 20.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gate4BB01 Marker 123.6 (cM) Automated name-based View Maps
Cotton - PK - A03 Gate4BB01 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate4BB01 Marker Cotton 3,629,234 - 3,629,758 (bp) Automated name-based View Maps
Gate4CE02 Marker 95.6 Cotton - HDC - 25 Gate4CE02 Marker 78.1 (cM) Automated name-based View Maps
M16_119 Marker 72.1 Cotton - HDC - 25 M16_119 Marker 96 (cM) Automated name-based View Maps
BW25.1(BT) QTL 6.4 - 12 No other positions
FF25.1 QTL 62.7 - 94.7 No other positions
FS25.1 QTL 71.3 - 93.8 No other positions
MLTD25.1 QTL 77.5 - 81.1 No other positions
SC25.1(BT) QTL 78.5 - 87 No other positions
A225.1 QTL 84.1 - 101.1 No other positions
FC25.1 QTL 89.5 - 100 No other positions
FF25.2 QTL 113.3 - 116.2 No other positions
FU25.1(HVui) QTL 9 - 31.6 No other positions
OP25.1(WL) QTL 71 - 80.7 No other positions
YLTD25.1 QTL 77.5 - 80.9 No other positions