CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set) 		Cotton-HDC
Min.
Correspondences
Align Vertically
Stack
Maps A01 13
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A01
Map Start: 0 cM
Map Stop: 173.4 cM
Features by Type:
107 Marker
11 QTL
118 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 76 to 100 of 118.       Previous | of 5 | Next
Cotton - PK - A01
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate2AB07 Marker 72.4 Cotton - HDC - 13 Gate2AB07 Marker 84.3 (cM) Automated name-based View Maps
Gate2BG10 Marker 33.7 Cotton - Graimondii_physical - Gr_Chr13 Gate2BG10 Marker Cotton 55,279,530 - 55,280,210 (bp) Automated name-based View Maps
Cotton - HDC - 13 Gate2BG10 Marker 108.7 (cM) Automated name-based View Maps
Gate2CF08 Marker 91.3 Cotton - HDC - 13 Gate2CF08 Marker 68.6 (cM) Automated name-based View Maps
Gate3BB11 Marker 110.1 Cotton - HDC - 13 Gate3BB11 Marker 51.8 (cM) Automated name-based View Maps
Cotton - PK - c18 Gate3BB11 Marker 105.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gate3BB11 Marker 42.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate3BB11 Marker Cotton 4,471,483 - 4,471,909 (bp) Automated name-based View Maps
Gate3CA10 Marker 100.9 Cotton - HDC - 13 Gate3CA10 Marker 58.1 (cM) Automated name-based View Maps
Gate3CC08 Marker 92.8 Cotton - HDC - 13 Gate3CC08 Marker 67.3 (cM) Automated name-based View Maps
Gate4BC01 Marker 8.4 Cotton - Graimondii_physical - Gr_Chr13 Gate4BC01 Marker Cotton 57,739,783 - 57,740,555 (bp) Automated name-based View Maps
Cotton - HDC - 3 Gate4BC01 Marker 98.6 (cM) Automated name-based View Maps
Cotton - PK - c3 Gate4BC01 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gate4BC01 Marker 117.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 Gate4BC01 Marker 26.2 (cM) Automated name-based View Maps
Cotton - PK - c12 Gate4BC01 Marker 186.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate4BC01 Marker 114.1 (cM) Automated name-based View Maps
Cotton - PK - c18 Gate4BC01 Marker 4.4 (cM) Automated name-based View Maps
Gate4BE04 Marker 96.2 Cotton - HDC - 13 Gate4BE04 Marker 61.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate4BE04 Marker Cotton 19,026,703 - 19,027,492 (bp) Automated name-based View Maps
Gate4CD04 Marker 64 Cotton - PK - c18 Gate4CD04 Marker 40.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gate4CD04 Marker 81.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate4CD04 Marker 90.2 (cM) Automated name-based View Maps
Gate4DB12 Marker 16.5 Cotton - HDC - 1 Gate4DB12 Marker 22.9 (cM) Automated name-based View Maps
Cotton - PK - c15 Gate4DB12 Marker 9.8 (cM) Automated name-based View Maps
Cotton - HDC - 15 Gate4DB12 Marker 12.8 (cM) Automated name-based View Maps
Cotton - PK - c1 Gate4DB12 Marker 2.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate4DB12 Marker 113 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate4DB12 Marker Cotton 62,310,347 - 62,311,115 (bp) Automated name-based View Maps
P05_11 Marker 80.1 Cotton - HDC - 13 P05_11 Marker 78 (cM) Automated name-based View Maps
Cotton - PK - c7 P05_11 Marker 47.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 P05_11 Marker 32 (cM) Automated name-based View Maps
PAR01C10 Marker 132.3 Cotton - Graimondii_physical - Gr_Chr13 pAR01C10 Marker Cotton 2,268,531 - 2,269,386 (bp) Automated name-based View Maps
Cotton - HDC - 13 pAR01C10 Marker 36.6 (cM) Automated name-based View Maps
PAR04E08 Marker 51.5 Cotton - HDC - 13 pAR04E08 Marker 99.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pAR04E08 Marker Cotton 61,445,587 - 61,446,053 (bp) Automated name-based View Maps
PAR07B01 Marker 146.1 Cotton - HDC - 13 pAR07B01 Marker 27.2 (cM) Automated name-based View Maps
PAR1_20 Marker 69.4 Cotton - HDC - 13 pAR01_20 Marker 86.4 (cM) Automated name-based View Maps
pAR238 Marker 34.5 Cotton - HDC - 13 pAR238 Marker 108.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pAR238 Marker Cotton 55,554,484 - 55,554,660 (bp) Automated name-based View Maps
pAR274 Marker 73.8 Cotton - PK - c18 pAR274 Marker 50.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pAR274 Marker Cotton 44,754,126 - 44,754,353 (bp) Automated name-based View Maps
Cotton - HDC - 13 pAR274 Marker 83.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 pAR274 Marker 92.9 (cM) Automated name-based View Maps
Cotton - GVc - 13 pAR274 Marker 49.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 pAR274 Marker 69.9 (cM) Automated name-based View Maps
pAR338 Marker 56.9 Cotton - PK - c18 pAR338 Marker 36.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pAR338 Marker Cotton 52,272,375 - 52,272,544 (bp) Automated name-based View Maps
Cotton - HDC - 18 pAR338 Marker 88.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR338 Marker 95.2 (cM) Automated name-based View Maps
pAR413 Marker 64.9 Cotton - Graimondii_physical - Gr_Chr13 pAR413 Marker Cotton 47,655,030 - 47,655,987 (bp) Automated name-based View Maps
Cotton - HDC - 18 pAR413 Marker 71.1 (cM) Automated name-based View Maps
Cotton - PK - c18 pAR413 Marker 47.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR413 Marker 89.6 (cM) Automated name-based View Maps
pAR454 Marker 129.4 Cotton - Graimondii_physical - Gr_Chr13 pAR454 Marker Cotton 2,454,808 - 2,455,723 (bp) Automated name-based View Maps
Cotton - PK - c18 pAR454 Marker 117.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 pAR454 Marker 38.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR454 Marker 38.6 (cM) Automated name-based View Maps
pAR674 Marker 151 Cotton - Graimondii_physical - Gr_Chr13 pAR674 Marker Cotton 556,430 - 557,452 (bp) Automated name-based View Maps
Cotton - HDC - 13 pAR674 Marker 23.8 (cM) Automated name-based View Maps
pAR788 Marker 56.9 Cotton - Graimondii_physical - Gr_Chr13 pAR788 Marker Cotton 51,778,434 - 51,779,391 (bp) Automated name-based View Maps
Cotton - PK - c18 pAR788 Marker 36.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 pAR788 Marker 64.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 pAR788 Marker 36.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 pAR788 Marker 32.7 (cM) Automated name-based View Maps
Cotton - PK - c18 pAR788 Marker 40.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 pAR788 Marker 88.3 (cM) Automated name-based View Maps
Cotton - GVc - 18 pAR788 Marker 31.2 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR788 Marker 95.2 (cM) Automated name-based View Maps
pAR898 Marker 152 Cotton - HDC - 13 pAR898 Marker 23.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 pAR898 Marker 11.8 (cM) Automated name-based View Maps
Cotton - PK - c18 pAR898 Marker 173.5 (cM) Automated name-based View Maps
pAR958 Marker 99 Cotton - Graimondii_physical - Gr_Chr01 pAR958 Marker Cotton 50,317,326 - 50,317,722 (bp) Automated name-based View Maps
Cotton - HDC - 13 pAR958 Marker 59.1 (cM) Automated name-based View Maps
pGH393 Marker 127.5 Cotton - HDC - 13 pGH393 Marker 39.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pGH393 Marker Cotton 2,534,230 - 2,535,166 (bp) Automated name-based View Maps