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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set) 		Cotton-HDC
Min.
Correspondences
Align Vertically
Stack
Maps 3 3
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 162 cM
Features by Type:
65 Marker
65 Total

Map Features

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Items 51 to 65 of 65.       Previous | of 3
Cotton - E3 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU2511 Marker 112.6 Cotton - Graimondii_physical - Gr_Chr05 HAU2511 Marker Cotton 59,065,186 - 59,066,414 (bp) Automated name-based View Maps
Cotton - HDC - 3 HAU2511 Marker 45.2 (cM) Automated name-based View Maps
MUSS162 Marker 110.6 Cotton - HDC - 3 MUSS162 Marker 46.9 (cM) Automated name-based View Maps
Cotton - T3 - 3 MUSS162 Marker 37.02 (cM) Automated name-based View Maps
Cotton - TH - 3 MUSS162 Marker 15.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 MUSS162 Marker Cotton 58,754,606 - 58,755,086 (bp) Automated name-based View Maps
BNL4017 Marker 110.6 Cotton - Graimondii_physical - Gr_Chr05 BNL4017 Marker Cotton 57,765,851 - 57,766,234 (bp) Automated name-based View Maps
Cotton - HDC - 3 BNL4017 Marker 48.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL4017 Marker 39.66 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL4017 Marker 45.4 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL4017 Marker 47.69 (cM) Automated name-based View Maps
BNL0244 Marker 107.3 Cotton - T3 - 14 BNL0244 Marker 57.52 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0244 Marker 54.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL0244 Marker 50.7 (cM) Automated name-based View Maps
NAU3573 Marker 106.6 Cotton - HDC - 3 NAU3573 Marker 51.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU3573 Marker 21.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU3573 Marker Cotton 61,754,484 - 61,755,290 (bp) Automated name-based View Maps
Cotton - TH - 14 NAU3573 Marker 12.6 (cM) Automated name-based View Maps
DPL0605 Marker 105.7 Cotton - Graimondii_physical - Gr_Chr05 DPL0605 Marker Cotton 56,253,821 - 56,254,498 (bp) Automated name-based View Maps
Cotton - HDC - 3 DPL0605 Marker 52.6 (cM) Automated name-based View Maps
Cotton - T3 - 3 DPL0605 Marker 43.53 (cM) Automated name-based View Maps
NAU3541 Marker 106.3 Cotton - HDC - 3 CLU4402 Marker 51.9 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU3541 Marker 23.9 (cM) Automated name-based View Maps
DPL0631 Marker 104.5 Cotton - HDC - 3 DPL0631 Marker 56.8 (cM) Automated name-based View Maps
Cotton - T3 - 3 DPL0631 Marker 47.94 (cM) Automated name-based View Maps
BNL0226 Marker 104.2 Cotton - TH - 3 BNL0226 Marker 16.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL226 Marker 67.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL0226a Marker 68.19 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL0226 Marker 78.7 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL0226 Marker 120 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL0226 Marker 46.98 (cM) Automated name-based View Maps
Cotton - PK - c3 BNL0226 Marker 96.9 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL0226 Marker 130.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL0226 Marker 55.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL226 Marker 99.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL0226 Marker Cotton 53,481,303 - 53,481,585 (bp) Automated name-based View Maps
Cotton - GVc - 3 BNL0226 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL226 Marker 99 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0226 Marker 53.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL0226b Marker 42.12 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL226 Marker 82.5 (cM) Automated name-based View Maps
DPL0733 Marker 101.3 Cotton - HDC - 3 DPL0733 Marker 68.2 (cM) Automated name-based View Maps
Cotton - T3 - 3 DPL0733 Marker 58.37 (cM) Automated name-based View Maps
BNL0140 Marker 98.2 Cotton - HDC - 3 BNL0140 Marker 62.2 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL0140 Marker 10.3 (cM) Automated name-based View Maps
Gh129 Marker 97.8 Cotton - T3 - 3 Gh129 Marker 53.19 (cM) Automated name-based View Maps
Cotton - HDC - 3 Gh129 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gh129 Marker Cotton 49,433,295 - 49,433,986 (bp) Automated name-based View Maps
MUSS172 Marker 97.5 Cotton - T3 - 3 MUSS172 Marker 57.45 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1372 Marker 67.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1372 Marker 68 (cM) Automated name-based View Maps
Gh681 Marker 93 Cotton - T3 - 3 Gh681 Marker 55.21 (cM) Automated name-based View Maps
Cotton - T3 - 13 Gh681 Marker 39.19 (cM) Automated name-based View Maps
Cotton - HDC - 13 CLU445 Marker 36.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU445 Marker 64.7 (cM) Automated name-based View Maps
Cotton - E3 - 13 Gh681 Marker 154.8 (cM) Automated name-based View Maps
BNL3398 Marker 97.1 Cotton - Graimondii_physical - Gr_Chr10 BNL3398 Marker Cotton 39,850,114 - 39,851,025 (bp) Automated name-based View Maps
Cotton - CH - 3 BNL3398 Marker 4.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3398 Marker 68.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3398 Marker 58.75 (cM) Automated name-based View Maps