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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set) 		Cotton-PK
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Maps c20 c10
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c20
Map Start: 0 cM
Map Stop: 100.22 cM
Features by Type:
34 Marker
1 QTL
35 Total

Map Features

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Items 26 to 35 of 35.       Previous | of 2
Cotton - Guazuncho2xVH8-RIL - c20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
JESPR190 Marker 85.74 Cotton - TH - 20 JESPR190 Marker 95.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 JESPR190 Marker Cotton 59,160,668 - 59,161,220 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 JESPR190 Marker 242.1 (cM) Automated name-based View Maps
Cotton - GVc - 20 JESPR190 Marker 140.5 (cM) Automated name-based View Maps
BNL3280b Marker 89.94 Cotton - Guazuncho2xVH8-BC2 - c18 BNL3280 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3280 Marker 245.3 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3280 Marker 107.1 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL3280 Marker 66.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL3280a Marker 56.2 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3280 Marker 77.1 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3280 Marker 103.42 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3280 Marker 65 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL3280 Marker 83.3 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL3280 Marker 47.32 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3280 Marker 144.9 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL3280 Marker 66.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3280 Marker 93 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL3280 Marker Cotton 36,736,808 - 36,737,272 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3280 Marker 118.9 (cM) Automated name-based View Maps
E43M50-M102.9 Marker 95.42 No other positions
BNL3646 Marker 96.8 Cotton - GVc - 20 BNL3646 Marker 158.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3646 Marker Cotton 61,792,601 - 61,792,808 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3646 Marker 263.6 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3646 Marker 111.7 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3646 Marker 115.53 (cM) Automated name-based View Maps
BNL2553 Marker 97.76 Cotton - TH - 20 BNL2553 Marker 113.3 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL2553 Marker 25.5 (cM) Automated name-based View Maps
Cotton - PK - c20 BNL2553 Marker 145.9 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL2553 Marker 159.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL2553 Marker 264.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL2553 Marker Cotton 62,003,659 - 62,004,132 (bp) Automated name-based View Maps
E35M48-M173.8 Marker 100.22 No other positions
E31M53-M131.0 Marker 57.74 Cotton - GVc - 20 E31M53-M131.0 Marker 96.7 (cM) Automated name-based View Maps
E42M48-M140.5 Marker 59.08 No other positions
E31M55-M132.9 Marker 66.42 Cotton - GVc - 20 E31M55-M132.9 Marker 106.5 (cM) Automated name-based View Maps
eQTL_10_dpa_c20 QTL 57 - 67 No other positions