CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set) 		Cotton-PK
Min.
Correspondences
Align Vertically
Stack
Maps c7 c16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c7
Map Start: 0 cM
Map Stop: 230.1 cM
Features by Type:
106 Marker
10 QTL
116 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 116.       Previous | of 5 | Next
Cotton - PK - c7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate1AE01 Marker 119.2 Cotton - Graimondii_physical - Gr_Chr08 Gate1AE01 Marker Cotton 54,538,935 - 54,539,403 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate1AE01 Marker 61.7 (cM) Automated name-based View Maps
Gate1BD08 Marker 184 Cotton - Graimondii_physical - Gr_Chr01 Gate1BD08 Marker Cotton 4,762,803 - 4,763,477 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate1BD08 Marker 121.1 (cM) Automated name-based View Maps
Gate1CB11 Marker 23.1 Cotton - HDC - 7 Gate1CB11 Marker 15.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Gate1CB11 Marker Cotton 53,050,734 - 53,051,569 (bp) Automated name-based View Maps
Cotton - PK - c16 Gate1CB11 Marker 11.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gate1CB11 Marker 12.7 (cM) Automated name-based View Maps
Gate1DG04 Marker 63.7 Cotton - HDC - 20 Gate1DG04 Marker 140.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate1DG04 Marker 22.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate1DG04 Marker 39.9 (cM) Automated name-based View Maps
Cotton - PK - c14 Gate1DG04 Marker 138.9 (cM) Automated name-based View Maps
Cotton - PK - c20 Gate1DG04 Marker 21.8 (cM) Automated name-based View Maps
Gate2DD02 Marker 143.7 Cotton - PK - c16 Gate2DD02 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate2DD02 Marker Cotton 61,161,131 - 61,161,828 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate2DD02 Marker 86.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gate2DD02 Marker 65 (cM) Automated name-based View Maps
Gate3BB10 Marker 118.5 Cotton - PK - A03 Gate3BB10 Marker 131.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 Gate3BB10 Marker 91.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Gate3BB10 Marker Cotton 12,706,728 - 12,707,207 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate3BB10 Marker 60.9 (cM) Automated name-based View Maps
Gate3BE11 Marker 78.5 Cotton - PK - c14 Gate3BE11 Marker 87.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate3BE11 Marker 64.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate3BE11 Marker 45.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gate3BE11 Marker Cotton 43,716,876 - 43,717,622 (bp) Automated name-based View Maps
Gate3CH01 Marker 112.1 Cotton - PK - D02 Gate3CH01 Marker 102.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 Gate3CH01 Marker 103.6 (cM) Automated name-based View Maps
Cotton - PK - D02 Gate3CH01 Marker 105.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate3CH01 Marker 58.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 Gate3CH01 Marker 105.4 (cM) Automated name-based View Maps
Gate4BG08 Marker 137.4 Cotton - HDC - 16 Gate4BG08 Marker 62.5 (cM) Automated name-based View Maps
Cotton - PK - c16 Gate4BG08 Marker 68.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate4BG08 Marker 80.2 (cM) Automated name-based View Maps
Gate4CF03 Marker 140.1 Cotton - HDC - 7 Gate4CF03 Marker 82.9 (cM) Automated name-based View Maps
P11_72 Marker 12.6 Cotton - HDC - 7 P11_72 Marker 8.4 (cM) Automated name-based View Maps
pAR024 Marker 118.5 Cotton - PK - A03 pAR024 Marker 104.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 pAR024 Marker 111.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR024 Marker 108.7 (cM) Automated name-based View Maps
Cotton - PK - D02 pAR024 Marker 98.5 (cM) Automated name-based View Maps
Cotton - GVc - 7 pAR024 Marker 30.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR024 Marker 70.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR024 Marker 60.9 (cM) Automated name-based View Maps
pAR048 Marker 187 Cotton - HDC - 25 pAR048 Marker 67.2 (cM) Automated name-based View Maps
Cotton - GVc - 25 pAR048 Marker 87.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 pAR048 Marker 111.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR048 Marker 123.5 (cM) Automated name-based View Maps
PAR04D08 Marker 51.9 Cotton - HDC - 7 pAR04D08 Marker 34.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR04D08 Marker 140.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR04D08 Marker Cotton 1,586,327 - 1,586,659 (bp) Automated name-based View Maps
pAR057 Marker 37.4 Cotton - HDC - 7 pAR057 Marker 25 (cM) Automated name-based View Maps
Cotton - GVc - 7 pAR057 Marker 4.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR057 Marker 36.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR057 Marker 34 (cM) Automated name-based View Maps
PAR06A09 Marker 169.2 Cotton - HDC - 16 pAR06A09 Marker 80.6 (cM) Automated name-based View Maps
Cotton - PK - c16 PAR06A09 Marker 88.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR06A09 Marker 106.8 (cM) Automated name-based View Maps
PAR07A02 Marker 171.3 Cotton - HDC - 7 pAR07A02 Marker 109.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR07A02 Marker Cotton 6,882,794 - 6,883,281 (bp) Automated name-based View Maps
pAR10F06 Marker 184 Cotton - Graimondii_physical - Gr_Chr01 pAR10F06 Marker Cotton 3,502,401 - 3,502,657 (bp) Automated name-based View Maps
Cotton - HDC - 7 pAR10F06 Marker 121.1 (cM) Automated name-based View Maps
pAR141 Marker 119.9 Cotton - HDC - 7 pAR141 Marker 62.4 (cM) Automated name-based View Maps
pAR188 Marker 54.3 Cotton - HDC - 7 pAR188 Marker 36.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR188 Marker 34 (cM) Automated name-based View Maps
Cotton - GVc - 7 pAR188 Marker 4.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR188 Marker Cotton 47,363,285 - 47,363,945 (bp) Automated name-based View Maps
pAR210 Marker 131.8 Cotton - HDC - 7 pAR210 Marker 74.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR210 Marker Cotton 19,453,819 - 19,454,438 (bp) Automated name-based View Maps
pAR291 Marker 96.1 Cotton - PK - c16 pAR291 Marker 52.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR291 Marker 52.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR291 Marker 47.9 (cM) Automated name-based View Maps
PAR3_36 Marker 118.5 No other positions
pAR395 Marker 218.5 Cotton - HDC - 7 pAR395 Marker 146.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR395 Marker Cotton 826,350 - 827,196 (bp) Automated name-based View Maps
pAR615 Marker 169.2 Cotton - HDC - 7 pAR615 Marker 106.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR615 Marker Cotton 8,152,213 - 8,152,773 (bp) Automated name-based View Maps