CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Cotton-PK
Min.
Correspondences
Align Vertically
Stack
Maps c7 c16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c7
Map Start: 0 cM
Map Stop: 230.1 cM
Features by Type:
106 Marker
10 QTL
116 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 101 to 116 of 116.       Previous | of 5
Cotton - PK - c7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gafb05F01 Marker 15.6 Cotton - Graimondii_physical - Gr_Chr01 Gafb05F01 Marker Cotton 53,888,995 - 53,889,689 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gafb05F01 Marker 10.4 (cM) Automated name-based View Maps
Gate1AA05 Marker 62.6 Cotton - Graimondii_physical - Gr_Chr12 Gate1AA05 Marker Cotton 31,003,913 - 31,004,378 (bp) Automated name-based View Maps
Cotton - HDC - 22 Gate1AA05 Marker 80.1 (cM) Automated name-based View Maps
Cotton - PK - c22 Gate1AA05 Marker 11.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate1AA05 Marker 39.5 (cM) Automated name-based View Maps
Gate1AD04 Marker 149.2 Cotton - HDC - 13 Gate1AD04 Marker 111.7 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate1AD04 Marker 75.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate1AD04 Marker Cotton 57,420,055 - 57,420,517 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate1AD04 Marker 92.1 (cM) Automated name-based View Maps
Cotton - PK - A01 Gate1AD04 Marker 26.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate1AD04 Marker 74.6 (cM) Automated name-based View Maps
Gate1AH04 Marker 145.9 Cotton - Graimondii_physical - Gr_Chr01 Gate1AH04 Marker Cotton 15,106,663 - 15,107,132 (bp) Automated name-based View Maps
Cotton - HDC - 16 Gate1AH04 Marker 67.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate1AH04 Marker 88.8 (cM) Automated name-based View Maps
Cotton - PK - c16 Gate1AH04 Marker 73.6 (cM) Automated name-based View Maps
Gate1BF05 Marker 107.5 Cotton - HDC - 7 Gate1BF05 Marker 56.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate1BF05 Marker Cotton 31,859,830 - 31,860,541 (bp) Automated name-based View Maps
Cotton - HDC - 19 Gate1BF05 Marker 60.7 (cM) Automated name-based View Maps
Cotton - PK - c3 Gate1BF05 Marker 150.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 Gate1BF05 Marker 39 (cM) Automated name-based View Maps
Cotton - PK - D08 Gate1BF05 Marker 179.7 (cM) Automated name-based View Maps
Gate1CF06 Marker 218.5 Cotton - HDC - 7 Gate1CF06 Marker 146.1 (cM) Automated name-based View Maps
Cotton - PK - A02 Gate1CF06 Marker 3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate1CF06 Marker Cotton 54,792,219 - 54,792,906 (bp) Automated name-based View Maps
Cotton - HDC - 8 Gate1CF06 Marker 10.8 (cM) Automated name-based View Maps
FC07.1 QTL 24.8 - 54.3 No other positions
FL07.1(HVsl2.5,HVuhm) QTL 175.2 - 175.3 Cotton - PK - c17 FL17.1(HVsl2.5,HVuhm) QTL 0 - 22.7 (cM) Automated name-based View Maps
Cotton - PK - c1 FL01.1(HVsl2.5,HVuhm) QTL 55.9 - 126 (cM) Automated name-based View Maps
Cotton - PK - c12 FL12.1(HVsl2.5,HVuhm) QTL 17.6 - 52.8 (cM) Automated name-based View Maps
Cotton - PK - A02 FLA02.1(HVsl2.5,HVuhm) QTL 15 - 46.3 (cM) Automated name-based View Maps
FS07.2 QTL 136.5 - 147.5 No other positions
OP07.1(BT) QTL 26.5 - 54.3 No other positions
YLTD07.1 QTL 169.2 - 183 No other positions
BN07.1(BT) QTL 165.3 - 184 No other positions
FF07.1 QTL 169.2 - 196.9 No other positions
FS07.1 QTL 18.6 - 54.3 No other positions
FU07.1(FLU) QTL 36.3 - 54.3 No other positions
SC07.1(BT) QTL 165.3 - 186 No other positions