CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Cotton-PK
Min.
Correspondences
Align Vertically
Stack
Maps c17 c26
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c17
Map Start: 0 cM
Map Stop: 84 cM
Features by Type:
57 Marker
11 QTL
68 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 68.       Previous | of 3 | Next
Cotton - PK - c17
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
A1583 Marker 15.2 Cotton - GVc - 15 A1583 Marker 54.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 A1583 Marker 115.3 (cM) Automated name-based View Maps
Cotton - GVc - 12 A1583 Marker 31.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 A1583 Marker Cotton 52,873,085 - 52,873,730 (bp) Automated name-based View Maps
Cotton - HDC - 15 A1583 Marker 77.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 A1583 Marker 34.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 A1583 Marker 91 (cM) Automated name-based View Maps
Cotton - HDC - 12 A1583 Marker 92.5 (cM) Automated name-based View Maps
A1824 Marker 57 Cotton - Graimondii_physical - Gr_Chr03 A1824 Marker Cotton 12,672,762 - 12,674,103 (bp) Automated name-based View Maps
Cotton - HDC - 17 A1824 Marker 71.7 (cM) Automated name-based View Maps
AGR0689/93C12E5 Marker 61.5 Cotton - HDC - 17 AGR0689/93C12E5 Marker 67 (cM) Automated name-based View Maps
BNL3955 Marker 53.5 Cotton - GVc - 6 BNL3955 Marker 64.4 (cM) Automated name-based View Maps
Cotton - PK - c22 BNL3955 Marker 25 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL3955 Marker 87.5 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3955 Marker 122.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3955 Marker 36.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3955 Marker 143.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL3955 Marker 67.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3955 Marker 69.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3955 Marker 193.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3955 Marker Cotton 47,731,898 - 47,732,520 (bp) Automated name-based View Maps
Cotton - T3 - 17 BNL3955 Marker 44.77 (cM) Automated name-based View Maps
Coau2I16 Marker 30.8 Cotton - HDC - 17 Coau2I16 Marker 99 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Coau2I16 Marker Cotton 41,932,285 - 41,932,892 (bp) Automated name-based View Maps
Coau2O04 Marker 51.7 Cotton - Graimondii_physical - Gr_Chr03 Coau2O04 Marker Cotton 21,700,549 - 21,701,238 (bp) Automated name-based View Maps
Cotton - HDC - 17 Coau2O04 Marker 77.4 (cM) Automated name-based View Maps
G1071 Marker 0 Cotton - HDC - 17 G1071 Marker 131.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 G1071 Marker Cotton 10,399,116 - 10,400,940 (bp) Automated name-based View Maps
G1258 Marker 55.3 Cotton - HDC - 17 G1258 Marker 73.4 (cM) Automated name-based View Maps
Cotton - GVc - 17 G1258 Marker 26.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 G1258 Marker Cotton 4,247,353 - 4,248,114 (bp) Automated name-based View Maps
Cotton - HDC - 13 G1258 Marker 47.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 G1258 Marker 44.3 (cM) Automated name-based View Maps
Cotton - PK - A01 G1258 Marker 115.7 (cM) Automated name-based View Maps
Gate1AA08 Marker 51.7 Cotton - HDC - 17 Gate1AA08 Marker 77.4 (cM) Automated name-based View Maps
Cotton - PK - c6 Gate1AA08 Marker 126.7 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate1AA08 Marker 0 (cM) Automated name-based View Maps
Gate1BE07 Marker 41.5 Cotton - Graimondii_physical - Gr_Chr03 Gate1BE07 Marker Cotton 37,665,514 - 37,666,230 (bp) Automated name-based View Maps
Cotton - HDC - 17 Gate1BE07 Marker 87.9 (cM) Automated name-based View Maps
Gate2CB12 Marker 82.4 Cotton - HDC - 13 Gate2CB12 Marker 91.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 Gate2CB12 Marker 45.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gate2CB12 Marker Cotton 28,907,494 - 28,908,241 (bp) Automated name-based View Maps
Cotton - PK - A01 Gate2CB12 Marker 62.7 (cM) Automated name-based View Maps
Gate3BE03 Marker 55.3 Cotton - HDC - 17 Gate3BE03 Marker 73.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Gate3BE03 Marker Cotton 24,645,952 - 24,646,672 (bp) Automated name-based View Maps
Gate4AB10 Marker 52.6 Cotton - HDC - 17 Gate4AB10 Marker 76.4 (cM) Automated name-based View Maps
Gate4CD12 Marker 41.6 Cotton - HDC - 17 Gate4CD12 Marker 87.8 (cM) Automated name-based View Maps
Cotton - PK - c3 Gate4CD12 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate4CD12 Marker 99.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Gate4CD12 Marker Cotton 12,405,315 - 12,405,586 (bp) Automated name-based View Maps
Cotton - HDC - 3 Gate4CD12 Marker 98.6 (cM) Automated name-based View Maps
Cotton - PK - c7 Gate4CD12 Marker 156.1 (cM) Automated name-based View Maps
P02_49 Marker 57 Cotton - HDC - 17 P02_49 Marker 71.7 (cM) Automated name-based View Maps
pAR030 Marker 44.5 Cotton - Graimondii_physical - Gr_Chr03 pAR030 Marker Cotton 39,345,939 - 39,346,512 (bp) Automated name-based View Maps
Cotton - HDC - 17 pAR030 Marker 84.8 (cM) Automated name-based View Maps
PAR1_08 Marker 41.6 Cotton - PK - c5 PAR1_08 Marker 53.7 (cM) Automated name-based View Maps
pAR172 Marker 53.5 Cotton - PK - c3 pAR172 Marker 71.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pAR172 Marker Cotton 30,209,213 - 30,209,927 (bp) Automated name-based View Maps
Cotton - HDC - 3 pAR172 Marker 79.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 pAR172 Marker 29.9 (cM) Automated name-based View Maps
Cotton - GVc - 3 pAR172 Marker 34.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 pAR172 Marker 36.4 (cM) Automated name-based View Maps
Cotton - GVc - 17 pAR172 Marker 24.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 pAR172 Marker 75.5 (cM) Automated name-based View Maps
pAR250 Marker 55.3 Cotton - HDC - 17 pAR250 Marker 73.4 (cM) Automated name-based View Maps
pAR396 Marker 66 Cotton - HDC - 17 pAR396 Marker 62.3 (cM) Automated name-based View Maps
Cotton - PK - c25 pAR396 Marker 88.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 pAR396 Marker 79.5 (cM) Automated name-based View Maps
pGH379 Marker 56.2 Cotton - Graimondii_physical - Gr_Chr03 pGH379 Marker Cotton 19,347,482 - 19,348,084 (bp) Automated name-based View Maps
Cotton - HDC - 17 pGH379 Marker 72.5 (cM) Automated name-based View Maps
pGH399 Marker 55.3 Cotton - Graimondii_physical - Gr_Chr03 pGH399 Marker Cotton 24,163,072 - 24,163,809 (bp) Automated name-based View Maps
Cotton - HDC - 17 pGH399 Marker 73.4 (cM) Automated name-based View Maps
Cotton - HDC - 2 pGH399 Marker 61.3 (cM) Automated name-based View Maps
Cotton - PK - c2 pGH399 Marker 91.5 (cM) Automated name-based View Maps
pGH498 Marker 46.2 Cotton - HDC - 17 pGH498 Marker 83.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pGH498 Marker Cotton 38,370,966 - 38,371,715 (bp) Automated name-based View Maps
pGH639 Marker 37.1 Cotton - GVc - 3 pGH639 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 3 pGH639 Marker 110.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 pGH639 Marker 92.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 pGH639 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pGH639 Marker Cotton 41,355,951 - 41,356,420 (bp) Automated name-based View Maps
Cotton - PK - c3 pGH639 Marker 44.2 (cM) Automated name-based View Maps
Cotton - GVc - 17 pGH639 Marker 9.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 pGH639 Marker 8.5 (cM) Automated name-based View Maps
pXP4_01 Marker 51.7 Cotton - HDC - 17 pXP4_01 Marker 77.4 (cM) Automated name-based View Maps