CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set) 		Cotton-PK
Min.
Correspondences
Align Vertically
Stack
Maps c22 c26
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c22
Map Start: 0 cM
Map Stop: 95.4 cM
Features by Type:
64 Marker
11 QTL
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 75.       Previous | of 3 | Next
Cotton - PK - c22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pARC_14 Marker 59.9 Cotton - HDC - 22 pARC_14 Marker 33.8 (cM) Automated name-based View Maps
pGH272 Marker 49.4 Cotton - HDC - 22 pGH272 Marker 43.9 (cM) Automated name-based View Maps
Cotton - PK - c5 pGH272 Marker 156.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 pGH272 Marker 48 (cM) Automated name-based View Maps
pVNC146 Marker 36.8 Cotton - Graimondii_physical - Gr_Chr12 pVNC146 Marker Cotton 26,554,798 - 26,555,816 (bp) Automated name-based View Maps
Cotton - HDC - 22 pVNC146 Marker 57.3 (cM) Automated name-based View Maps
PXP3_60 Marker 62.4 Cotton - HDC - 22 pXP3_60 Marker 31.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 PXP3_60 Marker Cotton 5,180,143 - 5,180,616 (bp) Automated name-based View Maps
Unig22C01 Marker 19.5 Cotton - HDC - 15 Unig22C01 Marker 152.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Unig22C01 Marker Cotton 61,523,675 - 61,524,118 (bp) Automated name-based View Maps
Cotton - PK - c15 Unig22C01 Marker 116.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 Unig22C01 Marker 72.4 (cM) Automated name-based View Maps
Unig26B02 Marker 44.9 Cotton - PK - c5 Unig26B02 Marker 155.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 Unig26B02 Marker 46.2 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig26B02 Marker 48.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Unig26B02 Marker Cotton 14,074,042 - 14,074,714 (bp) Automated name-based View Maps
Cotton - HDC - 22 Unig26B02 Marker 48.3 (cM) Automated name-based View Maps
Unig26F05 Marker 19.5 Cotton - HDC - 22 Unig26F05 Marker 72.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Unig26F05 Marker Cotton 32,228,146 - 32,228,539 (bp) Automated name-based View Maps
A1184 Marker 27.3 Cotton - Graimondii_physical - Gr_Chr12 A1184 Marker Cotton 30,523,282 - 30,523,823 (bp) Automated name-based View Maps
Cotton - HDC - 22 A1184 Marker 65.9 (cM) Automated name-based View Maps
A1528 Marker 65.3 Cotton - HDC - 22 A1528 Marker 28.7 (cM) Automated name-based View Maps
A1618 Marker 57.9 Cotton - Graimondii_physical - Gr_Chr12 A1618 Marker Cotton 6,101,823 - 6,102,316 (bp) Automated name-based View Maps
Cotton - HDC - 22 A1618 Marker 35.8 (cM) Automated name-based View Maps
BNL1045 Marker 36.8 Cotton - GVc - 26 BNL1045 Marker 22.2 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU5 Marker 121.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL1045 Marker 49.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU5 Marker 74 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL1045 Marker 88.71 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU5 Marker 57.3 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL1045 Marker 83.5 (cM) Automated name-based View Maps
BNL1673 Marker 44.9 Cotton - HDC - 22 BNL1673 Marker 48.3 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL1673 Marker 72.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL1673 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL1673 Marker 81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL1673 Marker 34.22 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL1673 Marker 60.2 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL1673 Marker 83.2 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL1673 Marker 76.17 (cM) Automated name-based View Maps
Cotton - E3 - 12 BNL1673 Marker 116.4 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL1673 Marker 114.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL1673 Marker Cotton 42,588,287 - 42,588,583 (bp) Automated name-based View Maps
Coau1J04 Marker 43.4 Cotton - Graimondii_physical - Gr_Chr01 Coau1J04 Marker Cotton 23,367,398 - 23,368,104 (bp) Automated name-based View Maps
Cotton - HDC - 22 Coau1J04 Marker 50.1 (cM) Automated name-based View Maps
Gate1AA05 Marker 11.4 Cotton - HDC - 22 Gate1AA05 Marker 80.1 (cM) Automated name-based View Maps
Cotton - PK - c7 Gate1AA05 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate1AA05 Marker Cotton 31,003,913 - 31,004,378 (bp) Automated name-based View Maps
Cotton - HDC - 7 Gate1AA05 Marker 39.5 (cM) Automated name-based View Maps
Gate1CB01 Marker 95.4 Cotton - Graimondii_physical - Gr_Chr12 Gate1CB01 Marker Cotton 867,017 - 867,846 (bp) Automated name-based View Maps
Cotton - HDC - 22 Gate1CB01 Marker 0 (cM) Automated name-based View Maps
Gate1CH01 Marker 52 Cotton - PK - c5 Gate1CH01 Marker 153.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate1CH01 Marker 41.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate1CH01 Marker 51.1 (cM) Automated name-based View Maps
Gate2BB08 Marker 47.6 Cotton - HDC - 5 Gate2BB08 Marker 46.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate2BB08 Marker 45.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate2BB08 Marker 82.9 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate2BB08 Marker 159.5 (cM) Automated name-based View Maps
Cotton - PK - c9 Gate2BB08 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BB08 Marker 101.9 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate2BB08 Marker 100.1 (cM) Automated name-based View Maps
Gate2CC07 Marker 32.3 Cotton - Graimondii_physical - Gr_Chr12 Gate2CC07 Marker Cotton 29,076,955 - 29,077,388 (bp) Automated name-based View Maps
Cotton - HDC - 22 Gate2CC07 Marker 61.7 (cM) Automated name-based View Maps
Cotton - HDC - 4 Gate2CC07 Marker 63.8 (cM) Automated name-based View Maps
Cotton - PK - c4 Gate2CC07 Marker 90.5 (cM) Automated name-based View Maps
Gate3DG11 Marker 18.6 Cotton - HDC - 22 Gate3DG11 Marker 73.2 (cM) Automated name-based View Maps
Cotton - PK - c4 Gate3DG11 Marker 33.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 Gate3DG11 Marker 73.3 (cM) Automated name-based View Maps
Gate4AE10 Marker 44 Cotton - HDC - 4 Gate4AE10 Marker 59.5 (cM) Automated name-based View Maps
Cotton - PK - c4 Gate4AE10 Marker 108 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4AE10 Marker 49.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate4AE10 Marker Cotton 34,507,293 - 34,508,099 (bp) Automated name-based View Maps
Gate4BD10 Marker 17.6 Cotton - HDC - 22 Gate4BD10 Marker 74.2 (cM) Automated name-based View Maps
Cotton - PK - c18 Gate4BD10 Marker 100.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate4BD10 Marker Cotton 32,075,340 - 32,076,136 (bp) Automated name-based View Maps
Cotton - HDC - 18 Gate4BD10 Marker 44.9 (cM) Automated name-based View Maps
Gate4CA09 Marker 43.1 Cotton - PK - c23 Gate4CA09 Marker 106.7 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate4CA09 Marker 110.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate4CA09 Marker Cotton 59,017,433 - 59,018,146 (bp) Automated name-based View Maps
Cotton - HDC - 4 Gate4CA09 Marker 62 (cM) Automated name-based View Maps
Cotton - PK - c4 Gate4CA09 Marker 98.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4CA09 Marker 50.4 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate4CA09 Marker 110.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate4CA09 Marker 107.3 (cM) Automated name-based View Maps
Gate4CG05 Marker 34.1 Cotton - PK - c4 Gate4CG05 Marker 90.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4CG05 Marker 60.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 Gate4CG05 Marker 63.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4CG05 Marker 62.6 (cM) Automated name-based View Maps
Gate4DC01 Marker 93.4 Cotton - HDC - 22 Gate4DC01 Marker 1.9 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate4DC01 Marker 14.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate4DC01 Marker Cotton 1,006,501 - 1,007,260 (bp) Automated name-based View Maps
Cotton - PK - c5 Gate4DC01 Marker 226.9 (cM) Automated name-based View Maps
pAR043 Marker 34.1 Cotton - PK - c14 pAR043 Marker 26.4 (cM) Automated name-based View Maps
Cotton - HDC - 4 pAR043 Marker 61.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 pAR043 Marker 60.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 pAR043 Marker 113.2 (cM) Automated name-based View Maps
Cotton - PK - c4 pAR043 Marker 100 (cM) Automated name-based View Maps