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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 5
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 199.19 cM
Features by Type:
135 Marker
135 Total

Map Features

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Items 51 to 75 of 135.       Previous | of 6 | Next
Cotton - T3 - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR152 Marker 75.18 Cotton - HDC - 19 CIR152 Marker 99.4 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR152 Marker 87.14 (cM) Automated name-based View Maps
Cotton - HDC - 5 CIR152 Marker 98.6 (cM) Automated name-based View Maps
UCcg10454_108 Marker 75.66 Cotton - HDC - 5 UCcg10454_108 Marker 98.4 (cM) Automated name-based View Maps
UCcg10618_125 Marker 76.32 Cotton - HDC - 5 UCcg10618_125 Marker 98.2 (cM) Automated name-based View Maps
CIR062 Marker 77.05 Cotton - Guazuncho2xVH8-BC1 - D08 CIR062 Marker 114.5 (cM) Automated name-based View Maps
Cotton - HDC - 19 CIR062 Marker 96.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR062 Marker 157 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR062a Marker 30.57 (cM) Automated name-based View Maps
Cotton - T3 - 19 CIR062 Marker 89.93 (cM) Automated name-based View Maps
Cotton - HDC - 5 CIR062 Marker 97.9 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR062 Marker 35.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR062 Marker Cotton 18,241,162 - 18,241,488 (bp) Automated name-based View Maps
Cotton - GVc - 19 CIR062 Marker 97.7 (cM) Automated name-based View Maps
Cotton - TH - 19 CIR062 Marker 91.6 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR062 Marker 93.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 CIR062b Marker 37.94 (cM) Automated name-based View Maps
NAU0861 Marker 78.78 Cotton - HDC - 5 NAU0861 Marker 96.1 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU0861 Marker 139.1 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU0861 Marker 37.5 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU0861 Marker 96.1 (cM) Automated name-based View Maps
DPL0608 Marker 78.85 Cotton - Graimondii_physical - Gr_Chr09 DPL0608 Marker Cotton 18,963,495 - 18,964,132 (bp) Automated name-based View Maps
Cotton - HDC - 5 DPL0608 Marker 96.1 (cM) Automated name-based View Maps
UCcg10827_82 Marker 78.97 Cotton - HDC - 5 UCcg10827_82 Marker 96 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 UCcg10827_82 Marker Cotton 50,574,385 - 50,574,487 (bp) Automated name-based View Maps
UCcg11049_402 Marker 79.08 Cotton - HDC - 5 UCcg11049_402 Marker 95.9 (cM) Automated name-based View Maps
MUCS108 Marker 81.2 Cotton - HDC - 5 CLU2759 Marker 93.7 (cM) Automated name-based View Maps
Cotton - CH - 5 MUCS108 Marker 135.3 (cM) Automated name-based View Maps
Cotton - E3 - 5 MUCS108 Marker 138.5 (cM) Automated name-based View Maps
MUSS118 Marker 82.48 Cotton - HDC - 5 CLU2759 Marker 93.7 (cM) Automated name-based View Maps
Cotton - E3 - 5 MUSS118 Marker 140.7 (cM) Automated name-based View Maps
Gh083 Marker 87.83 Cotton - HDC - 5 Gh083 Marker 90.5 (cM) Automated name-based View Maps
Cotton - E3 - 5 Gh083 Marker 154.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gh083 Marker Cotton 21,634,222 - 21,634,898 (bp) Automated name-based View Maps
TMB0865 Marker 88.86 Cotton - HDC - 5 TMB0865 Marker 89.7 (cM) Automated name-based View Maps
Cotton - T3 - 19 TMB0865 Marker 95.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 TMB0865 Marker 90.1 (cM) Automated name-based View Maps
JESPR197 Marker 89.47 Cotton - HDC - 5 JESPR197 Marker 89.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 JESPR197 Marker Cotton 21,438,859 - 21,439,028 (bp) Automated name-based View Maps
Cotton - TH - 5 JESPR197 Marker 106.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 JESPR197 Marker 152 (cM) Automated name-based View Maps
CIR034 Marker 89.85 Cotton - CH - 5 CIR034 Marker 118.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR034 Marker Cotton 21,568,801 - 21,568,960 (bp) Automated name-based View Maps
Cotton - GVc - 5 CIR034 Marker 44 (cM) Automated name-based View Maps
Cotton - HDC - 5 CIR034 Marker 89.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR034 Marker 35.64 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR034 Marker 165.8 (cM) Automated name-based View Maps
BNL3992 Marker 90.08 Cotton - Guazuncho2xVH8-BC1 - c5 BNL3992 Marker 167.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL3992 Marker Cotton 21,481,240 - 21,481,867 (bp) Automated name-based View Maps
Cotton - TH - 5 BNL3992 Marker 104.7 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL3992 Marker 117.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL3992 Marker 88.7 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL3992 Marker 123.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3992 Marker 153.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL3992 Marker 47.3 (cM) Automated name-based View Maps
TMB1489 Marker 90.36 Cotton - T3 - 19 TMB1489 Marker 96.27 (cM) Automated name-based View Maps
Cotton - HDC - 5 TMB1489 Marker 88.5 (cM) Automated name-based View Maps
Cotton - HDC - 19 TMB1489 Marker 89.1 (cM) Automated name-based View Maps
DPL0384 Marker 91.08 Cotton - HDC - 5 DPL0384 Marker 87.8 (cM) Automated name-based View Maps
TMB1282 Marker 94.09 Cotton - T3 - 19 TMB1282 Marker 100.17 (cM) Automated name-based View Maps
Cotton - HDC - 5 TMB1282 Marker 84.8 (cM) Automated name-based View Maps
Cotton - HDC - 19 TMB1282 Marker 84.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 TMB1282 Marker Cotton 22,451,636 - 22,452,309 (bp) Automated name-based View Maps
TMB0131 Marker 95.31 Cotton - Graimondii_physical - Gr_Chr09 TMB0131 Marker Cotton 22,397,149 - 22,397,629 (bp) Automated name-based View Maps
Cotton - E3 - 19 TMB0131 Marker 147.1 (cM) Automated name-based View Maps
Cotton - T3 - 19 TMB0131 Marker 97.59 (cM) Automated name-based View Maps
Cotton - HDC - 19 TMB0131 Marker 87.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 TMB0131 Marker 83.6 (cM) Automated name-based View Maps
TMB0517 Marker 95.65 Cotton - HDC - 5 TMB0517 Marker 83.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 TMB0517 Marker Cotton 35,411,597 - 35,412,372 (bp) Automated name-based View Maps
UCcg11421_583 Marker 99.27 Cotton - HDC - 5 UCcg11421_583 Marker 79.6 (cM) Automated name-based View Maps
UCcg11421_108 Marker 99.43 Cotton - HDC - 5 UCcg11421_108 Marker 79.5 (cM) Automated name-based View Maps
BNL0542 Marker 101.65 Cotton - CH - 5 BNL0542 Marker 105.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL0542 Marker 58.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL542 Marker 177.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL0542 Marker 50.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL542 Marker 75.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL0542 Marker 77.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0542 Marker Cotton 24,289,365 - 24,289,705 (bp) Automated name-based View Maps
Cotton - TH - 5 BNL0542 Marker 120.9 (cM) Automated name-based View Maps
JESPR241 Marker 105.25 Cotton - HDC - 5 CLU165 Marker 72.9 (cM) Automated name-based View Maps
Cotton - CH - 5 JESPR241 Marker 98.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 JESPR241 Marker 55.06 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR241 Marker 64.1 (cM) Automated name-based View Maps
UCcg11011_77 Marker 107.99 Cotton - HDC - 5 UCcg11011_77 Marker 69.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 UCcg11011_77 Marker Cotton 45,109,470 - 45,109,572 (bp) Automated name-based View Maps