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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-RIL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c4
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-RIL [ View Map Set Info ]
Map Name: c4
Map Start: 0 cM
Map Stop: 69.74 cM
Features by Type:
27 Marker
2 QTL
29 Total

Map Features

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Items 26 to 29 of 29.       Previous | of 2
Cotton - Guazuncho2xVH8-RIL - c4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR187c Marker 61.62 Cotton - GVc - 20 CIR187 Marker 18 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR187 Marker 18.7 (cM) Automated name-based View Maps
Cotton - GVc - 8 CIR187 Marker 123.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 CIR187b Marker 48.44 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR187 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR187 Marker 1.39 (cM) Automated name-based View Maps
CIR223 Marker 69.74 Cotton - Guazuncho2xVH8-BC1 - c4 CIR223 Marker 190.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 CIR223 Marker Cotton 70,494,407 - 70,494,708 (bp) Automated name-based View Maps
Cotton - E3 - 4 CIR223 Marker 140.8 (cM) Automated name-based View Maps
eQTL_10_dpa_c4A QTL 35 - 39 No other positions
eQTL_10_dpa_c4B QTL 45 - 53 No other positions