CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c9
Map Start: 0 cM
Map Stop: 152.5 cM
Features by Type:
95 Marker
8 QTL
103 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 103.       Previous | of 5 | Next
Cotton - PK - c9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PAR07C05 Marker 118.3 Cotton - HDC - 9 pAR07C05 Marker 108.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR07C05 Marker Cotton 47,036,580 - 47,037,256 (bp) Automated name-based View Maps
pAR085 Marker 52.6 Cotton - Graimondii_physical - Gr_Chr06 pAR085 Marker Cotton 36,925,775 - 36,926,108 (bp) Automated name-based View Maps
Cotton - HDC - 9 pAR085 Marker 64.7 (cM) Automated name-based View Maps
pAR117 Marker 51.7 Cotton - HDC - 9 pAR117 Marker 64.1 (cM) Automated name-based View Maps
pAR144 Marker 146.7 Cotton - Guazuncho2xVH8-BC1 - c9 pAR144 Marker 64.4 (cM) Automated name-based View Maps
Cotton - PK - D02 pAR144 Marker 166.9 (cM) Automated name-based View Maps
Cotton - PK - c10 pAR144 Marker 137.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 pAR144 Marker 23.9 (cM) Automated name-based View Maps
Cotton - HDC - 26 pAR144 Marker 60 (cM) Automated name-based View Maps
Cotton - PK - c22 pAR144 Marker 47.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pAR144 Marker Cotton 36,335,971 - 36,336,504 (bp) Automated name-based View Maps
Cotton - PK - c26 pAR144 Marker 117.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR144 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 pAR144 Marker 45.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 pAR144 Marker 128.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 pAR144 Marker 49.3 (cM) Automated name-based View Maps
Cotton - GVc - 9 pAR144 Marker 17.2 (cM) Automated name-based View Maps
pAR288 Marker 0 Cotton - HDC - 14 pAR288 Marker 23.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 pAR288 Marker 15.4 (cM) Automated name-based View Maps
Cotton - PK - c14 pAR288 Marker 136.4 (cM) Automated name-based View Maps
pAR341 Marker 67 Cotton - Graimondii_physical - Gr_Chr06 pAR341 Marker Cotton 38,120,223 - 38,120,484 (bp) Automated name-based View Maps
Cotton - HDC - 9 pAR341 Marker 74.4 (cM) Automated name-based View Maps
pAR804 Marker 143.2 Cotton - HDC - 9 pAR804 Marker 125.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR804 Marker Cotton 49,354,671 - 49,355,475 (bp) Automated name-based View Maps
pAR873 Marker 125.7 Cotton - Graimondii_physical - Gr_Chr06 pAR873 Marker Cotton 47,692,919 - 47,693,650 (bp) Automated name-based View Maps
Cotton - HDC - 9 pAR873 Marker 113.8 (cM) Automated name-based View Maps
pARC_15 Marker 94.7 Cotton - Graimondii_physical - Gr_Chr06 pARC_15 Marker Cotton 44,013,710 - 44,014,181 (bp) Automated name-based View Maps
Cotton - HDC - 9 pARC_15 Marker 91.7 (cM) Automated name-based View Maps
pGH502 Marker 78.8 Cotton - HDC - 9 pGH502 Marker 84.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pGH502 Marker Cotton 42,500,623 - 42,501,474 (bp) Automated name-based View Maps
pGH783 Marker 79.9 Cotton - PK - c23 pGH783 Marker 111.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pGH783 Marker Cotton 42,603,421 - 42,604,202 (bp) Automated name-based View Maps
Cotton - HDC - 9 pGH783 Marker 85.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 pGH783 Marker 111.6 (cM) Automated name-based View Maps
PXP1_48 Marker 39.1 Cotton - Graimondii_physical - Gr_Chr06 PXP1_48 Marker Cotton 33,128,404 - 33,128,686 (bp) Automated name-based View Maps
Cotton - HDC - 9 pXP1_48 Marker 39.5 (cM) Automated name-based View Maps
PXP4_06 Marker 74.4 Cotton - Graimondii_physical - Gr_Chr06 PXP4_06 Marker Cotton 40,391,414 - 40,391,820 (bp) Automated name-based View Maps
Cotton - HDC - 9 pXP4_06 Marker 82.9 (cM) Automated name-based View Maps
Unig22D10 Marker 26.3 Cotton - HDC - 9 Unig22D10 Marker 22.8 (cM) Automated name-based View Maps
G1267 Marker 74.4 Cotton - HDC - 9 G1267 Marker 82.9 (cM) Automated name-based View Maps
Cotton - PK - c23 G1267 Marker 111.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 G1267 Marker Cotton 42,154,939 - 42,156,097 (bp) Automated name-based View Maps
Cotton - HDC - 23 G1267 Marker 111.3 (cM) Automated name-based View Maps
Coau2K19 Marker 30.4 Cotton - HDC - 9 Coau2K19 Marker 23.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Coau2K19 Marker Cotton 27,707,382 - 27,708,053 (bp) Automated name-based View Maps
Coau4H09 Marker 31.6 Cotton - HDC - 25 Coau4H09 Marker 83.8 (cM) Automated name-based View Maps
Cotton - PK - c25 Coau4H09 Marker 84.6 (cM) Automated name-based View Maps
Cotton - PK - c6 Coau4H09 Marker 42.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Coau4H09 Marker Cotton 18,597,192 - 18,597,889 (bp) Automated name-based View Maps
Cotton - HDC - 9 Coau4H09 Marker 23.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 Coau4H09 Marker 98.3 (cM) Automated name-based View Maps
Coau1L24 Marker 60.3 Cotton - Graimondii_physical - Gr_Chr06 Coau1L24 Marker Cotton 37,086,962 - 37,087,559 (bp) Automated name-based View Maps
Cotton - HDC - 9 Coau1L24 Marker 69.9 (cM) Automated name-based View Maps
Coau2C13 Marker 152.5 Cotton - Graimondii_physical - Gr_Chr11 Coau2C13 Marker Cotton 47,883,346 - 47,883,923 (bp) Automated name-based View Maps
Cotton - HDC - 9 Coau2C13 Marker 132.4 (cM) Automated name-based View Maps
Coau1C24 Marker 60.3 Cotton - Graimondii_physical - Gr_Chr06 Coau1C24 Marker Cotton 38,976,250 - 38,976,884 (bp) Automated name-based View Maps
Cotton - HDC - 9 Coau1C24 Marker 69.9 (cM) Automated name-based View Maps
Coau1H15 Marker 148.5 Cotton - HDC - 9 Coau1H15 Marker 129.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Coau1H15 Marker Cotton 50,181,108 - 50,181,710 (bp) Automated name-based View Maps
Unig26E09 Marker 75.3 Cotton - HDC - 9 Unig26E09 Marker 83.3 (cM) Automated name-based View Maps
Unig27F07 Marker 145.8 Cotton - HDC - 9 Unig27F07 Marker 127.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Unig27F07 Marker Cotton 50,051,680 - 50,052,330 (bp) Automated name-based View Maps
Unig28D02 Marker 101.1 Cotton - HDC - 9 Unig28D02 Marker 96.4 (cM) Automated name-based View Maps
A1270 Marker 51.7 Cotton - GVc - 23 A1270 Marker 70.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 A1270 Marker 95.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 A1270 Marker Cotton 36,930,413 - 36,931,304 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 A1270 Marker 137.5 (cM) Automated name-based View Maps
Cotton - PK - c23 A1270 Marker 92.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 A1270 Marker 64.1 (cM) Automated name-based View Maps