CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 239.6 cM
Features by Type:
166 Marker
12 QTL
178 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 178.       Previous | of 8 | Next
Cotton - PK - c5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pAR597 Marker 51.7 Cotton - PK - D08 pAR597 Marker 58.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 pAR597 Marker 148.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pAR597 Marker Cotton 7,515,031 - 7,515,661 (bp) Automated name-based View Maps
Cotton - HDC - 5 pAR597 Marker 86.3 (cM) Automated name-based View Maps
A1751 Marker 68.7 Cotton - HDC - 5 A1751 Marker 85.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1751 Marker 52.7 (cM) Automated name-based View Maps
Cotton - HDC - 19 A1751 Marker 122.1 (cM) Automated name-based View Maps
Cotton - PK - c4 A1751 Marker 134.6 (cM) Automated name-based View Maps
Cotton - PK - D08 A1751 Marker 92.3 (cM) Automated name-based View Maps
pAR897 Marker 76.9 Cotton - HDC - 25 pAR897 Marker 77.9 (cM) Automated name-based View Maps
Cotton - HDC - 5 pAR897 Marker 84.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR897 Marker 70.2 (cM) Automated name-based View Maps
Cotton - PK - c25 pAR897 Marker 96.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR897 Marker Cotton 38,911,252 - 38,912,081 (bp) Automated name-based View Maps
Cotton - GVc - 7 pAR897 Marker 30.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR897 Marker 60.9 (cM) Automated name-based View Maps
BNL1440 Marker 89.4 Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1440 Marker 83.8 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Cotton - HDC - 5 BNL1440 Marker 83.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1440 Marker 101.4 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
pAR931 Marker 7 Cotton - Guazuncho2xVH8-BC1 - c5 pAR931 Marker 22.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 pAR931 Marker 22.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pAR931 Marker Cotton 343,525 - 344,025 (bp) Automated name-based View Maps
Cotton - HDC - 5 pAR931 Marker 118.1 (cM) Automated name-based View Maps
BNL3992 Marker 117.3 Cotton - T3 - 5 BNL3992 Marker 90.08 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL3992 Marker 88.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL3992 Marker Cotton 21,481,240 - 21,481,867 (bp) Automated name-based View Maps
Cotton - GVc - 5 BNL3992 Marker 47.3 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3992 Marker 153.3 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL3992 Marker 123.4 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL3992 Marker 104.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3992 Marker 167.7 (cM) Automated name-based View Maps
pARC_07 Marker 108.9 Cotton - HDC - 5 pARC_07 Marker 82.3 (cM) Automated name-based View Maps
CMS04 Marker 83.1 Cotton - Graimondii_physical - Gr_Chr09 CMS04 Marker Cotton 14,242,774 - 14,243,432 (bp) Automated name-based View Maps
Cotton - HDC - 5 CMS04 Marker 84.1 (cM) Automated name-based View Maps
pGH372 Marker 57.1 Cotton - HDC - 5 pGH372 Marker 85.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pGH372 Marker Cotton 9,479,663 - 9,480,185 (bp) Automated name-based View Maps
Coau1E03 Marker 152.2 Cotton - HDC - 5 Coau1E03 Marker 52.1 (cM) Automated name-based View Maps
pVNC019 Marker 43.7 Cotton - HDC - 5 pVNC019 Marker 86.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 pVNC019 Marker 49.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pVNC019 Marker Cotton 6,410,658 - 6,411,474 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 pVNC019 Marker 52.4 (cM) Automated name-based View Maps
Coau1M05 Marker 205.9 Cotton - PK - c3 Coau1M05 Marker 129.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 Coau1M05 Marker 47.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 Coau1M05 Marker 24.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Coau1M05 Marker Cotton 60,320,381 - 60,321,014 (bp) Automated name-based View Maps
PVNC416 Marker 89.4 Cotton - HDC - 19 pVNC416 Marker 106.8 (cM) Automated name-based View Maps
Cotton - PK - D08 PVNC416 Marker 108.2 (cM) Automated name-based View Maps
Cotton - HDC - 5 pVNC416 Marker 83.6 (cM) Automated name-based View Maps
Coau2E04 Marker 136.3 Cotton - HDC - 5 Coau2E04 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Coau2E04 Marker Cotton 5,682,501 - 5,683,108 (bp) Automated name-based View Maps
PXP1_77 Marker 149.7 Cotton - Graimondii_physical - Gr_Chr04 PXP1_77 Marker Cotton 8,535,190 - 8,535,459 (bp) Automated name-based View Maps
Cotton - HDC - 5 pXP1_77 Marker 54.8 (cM) Automated name-based View Maps
Coau2H13 Marker 126.1 Cotton - Graimondii_physical - Gr_Chr09 Coau2H13 Marker Cotton 14,593,821 - 14,594,418 (bp) Automated name-based View Maps
Cotton - HDC - 5 Coau2H13 Marker 81.1 (cM) Automated name-based View Maps
PXP2_84 Marker 10.6 Cotton - HDC - 5 pXP2_84 Marker 105.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 PXP2_84 Marker Cotton 1,929,362 - 1,930,092 (bp) Automated name-based View Maps
Coau3F17 Marker 184 Cotton - PK - c10 Coau3F17 Marker 75.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 Coau3F17 Marker 106.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 Coau3F17 Marker 34.9 (cM) Automated name-based View Maps
PXP3_07 Marker 214.2 Cotton - GVc - 9 pXP3_07 Marker 120.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 pXP3_07 Marker 20.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 pXP3_07 Marker 135 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 PXP3_07 Marker Cotton 2,758,254 - 2,758,891 (bp) Automated name-based View Maps
ESTS178 Marker 153.1 Cotton - Graimondii_physical - Gr_Chr12 ESTS178 Marker Cotton 8,473,067 - 8,473,895 (bp) Automated name-based View Maps
Cotton - HDC - 5 ESTS178 Marker 51.1 (cM) Automated name-based View Maps
pXP5_21 Marker 115.2 Cotton - HDC - 5 pXP5_21 Marker 81.8 (cM) Automated name-based View Maps
G1025 Marker 129.2 Cotton - HDC - 19 G1025 Marker 82.9 (cM) Automated name-based View Maps
Cotton - HDC - 5 G1025 Marker 77.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 G1025 Marker Cotton 23,168,767 - 23,170,290 (bp) Automated name-based View Maps
Cotton - PK - D08 G1025 Marker 145.8 (cM) Automated name-based View Maps
Unig06G09 Marker 13.3 Cotton - Graimondii_physical - Gr_Chr09 Unig06G09 Marker Cotton 3,671,746 - 3,672,401 (bp) Automated name-based View Maps
Cotton - HDC - 5 Unig06G09 Marker 104.2 (cM) Automated name-based View Maps
G1054 Marker 119.2 Cotton - HDC - 5 G1054 Marker 81.6 (cM) Automated name-based View Maps
Unig22C06 Marker 49.7 Cotton - HDC - 5 Unig22C06 Marker 86.4 (cM) Automated name-based View Maps