CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 239.6 cM
Features by Type:
166 Marker
12 QTL
178 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 178.       Previous | of 8 | Next
Cotton - PK - c5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
G1119 Marker 83.1 Cotton - Graimondii_physical - Gr_Chr09 G1119 Marker Cotton 14,359,859 - 14,360,368 (bp) Automated name-based View Maps
Cotton - PK - D08 G1119 Marker 98.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 G1119 Marker 84.1 (cM) Automated name-based View Maps
Cotton - HDC - 19 G1119 Marker 115.4 (cM) Automated name-based View Maps
Unig22F03 Marker 191 Cotton - HDC - 5 Unig22F03 Marker 31.6 (cM) Automated name-based View Maps
G1228 Marker 68.7 Cotton - Graimondii_physical - Gr_Chr09 G1228 Marker Cotton 11,862,585 - 11,863,130 (bp) Automated name-based View Maps
Cotton - HDC - 5 G1228 Marker 85.1 (cM) Automated name-based View Maps
Cotton - PK - D08 G1228 Marker 96.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 G1228 Marker 118.1 (cM) Automated name-based View Maps
Unig22F08 Marker 10.6 Cotton - HDC - 5 Unig22F08 Marker 105.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig22F08 Marker Cotton 1,785,297 - 1,785,908 (bp) Automated name-based View Maps
Gafb08C24 Marker 10.6 Cotton - PK - c25 Gafb08C24 Marker 67.6 (cM) Automated name-based View Maps
Cotton - PK - c25 Gafb08C24 Marker 74.8 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gafb08C24 Marker 101.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gafb08C24 Marker 105.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gafb08C24 Marker 92.8 (cM) Automated name-based View Maps
Unig23B08 Marker 93.8 Cotton - HDC - 5 Unig23B08 Marker 83.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig23B08 Marker Cotton 16,183,731 - 16,184,374 (bp) Automated name-based View Maps
Gate1AB04 Marker 182.2 Cotton - HDC - 5 Gate1AB04 Marker 35.7 (cM) Automated name-based View Maps
Unig23F09 Marker 17.8 Cotton - Graimondii_physical - Gr_Chr13 Unig23F09 Marker Cotton 53,584,695 - 53,585,389 (bp) Automated name-based View Maps
Cotton - HDC - 5 Unig23F09 Marker 101.6 (cM) Automated name-based View Maps
Gate1CB02 Marker 189.6 Cotton - Graimondii_physical - Gr_Chr12 Gate1CB02 Marker Cotton 32,921,148 - 32,921,710 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate1CB02 Marker 32.2 (cM) Automated name-based View Maps
Unig23G09 Marker 83.1 Cotton - HDC - 5 Unig23G09 Marker 84.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig23G09 Marker 85.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig23G09 Marker Cotton 13,776,869 - 13,777,527 (bp) Automated name-based View Maps
Gate1CC04 Marker 58 Cotton - HDC - 5 Gate1CC04 Marker 86 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate1CC04 Marker Cotton 8,970,723 - 8,971,553 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate1CC04 Marker 85.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate1CC04 Marker 1.1 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate1CC04 Marker 1.1 (cM) Automated name-based View Maps
Unig24G01 Marker 108 Cotton - HDC - 5 Unig24G01 Marker 82.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig24G01 Marker 82.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig24G01 Marker Cotton 18,502,186 - 18,502,854 (bp) Automated name-based View Maps
Gate2AD04 Marker 107.1 Cotton - HDC - 5 Gate2AD04 Marker 82.4 (cM) Automated name-based View Maps
Unig25E12 Marker 162.7 Cotton - Graimondii_physical - Gr_Chr11 Unig25E12 Marker Cotton 62,335,885 - 62,336,530 (bp) Automated name-based View Maps
Cotton - HDC - 5 Unig25E12 Marker 44.9 (cM) Automated name-based View Maps
Gate2BG07 Marker 4.4 Cotton - Graimondii_physical - Gr_Chr09 Gate2BG07 Marker Cotton 492,330 - 492,919 (bp) Automated name-based View Maps
Cotton - HDC - 19 Gate2BG07 Marker 178.7 (cM) Automated name-based View Maps
Cotton - HDC - 19 Gate2BG07 Marker 182.6 (cM) Automated name-based View Maps
Cotton - PK - D08 Gate2BG07 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate2BG07 Marker 119.3 (cM) Automated name-based View Maps
Cotton - PK - D08 Gate2BG07 Marker 5.5 (cM) Automated name-based View Maps
Unig25G02 Marker 91.6 Cotton - HDC - 5 Unig25G02 Marker 83.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig25G02 Marker Cotton 17,290,763 - 17,291,426 (bp) Automated name-based View Maps
Gate2CE06 Marker 155.7 Cotton - Graimondii_physical - Gr_Chr12 Gate2CE06 Marker Cotton 13,472,161 - 13,472,858 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate2CE06 Marker 48.2 (cM) Automated name-based View Maps
Unig26B10 Marker 93.8 Cotton - HDC - 5 Unig26B10 Marker 83.3 (cM) Automated name-based View Maps
Cotton - PK - D08 Unig26B10 Marker 119 (cM) Automated name-based View Maps
Cotton - HDC - 19 Unig26B10 Marker 99.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig26B10 Marker Cotton 16,718,813 - 16,719,466 (bp) Automated name-based View Maps
Gate3BG11 Marker 17.8 Cotton - PK - A03 Gate3BG11 Marker 145.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 Gate3BG11 Marker 8.61 (cM) Automated name-based View Maps
Cotton - HDC - 11 Gate3BG11 Marker 72.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate3BG11 Marker 101.6 (cM) Automated name-based View Maps
Unig26C08 Marker 50.7 Cotton - HDC - 5 Unig26C08 Marker 86.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig26C08 Marker Cotton 8,402,252 - 8,402,916 (bp) Automated name-based View Maps
Gate3CC12 Marker 161.6 Cotton - HDC - 5 Gate3CC12 Marker 45.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 Gate3CC12 Marker 57.2 (cM) Automated name-based View Maps
Cotton - PK - D08 Gate3CC12 Marker 183.2 (cM) Automated name-based View Maps
Unig26H12 Marker 100 Cotton - HDC - 5 Unig26H12 Marker 82.9 (cM) Automated name-based View Maps
Gate3DG09 Marker 112.8 Cotton - HDC - 5 Gate3DG09 Marker 82 (cM) Automated name-based View Maps
Unig28C07 Marker 68.7 Cotton - HDC - 5 Unig28C07 Marker 85.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 Unig28C07 Marker 138.7 (cM) Automated name-based View Maps
Cotton - PK - c10 Unig28C07 Marker 38.7 (cM) Automated name-based View Maps
Gate4AF11 Marker 236.4 Cotton - HDC - 5 Gate4AF11 Marker 10.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate4AF11 Marker Cotton 28,912,714 - 28,913,524 (bp) Automated name-based View Maps