CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c5
Map Start: 0 cM
Map Stop: 239.6 cM
Features by Type:
166 Marker
12 QTL
178 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 101 to 125 of 178.       Previous | of 8 | Next
Cotton - PK - c5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate1CC04 Marker 55.4 Cotton - HDC - 5 Gate1CC04 Marker 85.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate1CC04 Marker Cotton 8,970,723 - 8,971,553 (bp) Automated name-based View Maps
Cotton - HDC - 23 Gate1CC04 Marker 1.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate1CC04 Marker 86 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate1CC04 Marker 1.1 (cM) Automated name-based View Maps
Unig23G09 Marker 65.1 Cotton - HDC - 5 Unig23G09 Marker 85.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig23G09 Marker 84.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig23G09 Marker Cotton 13,776,869 - 13,777,527 (bp) Automated name-based View Maps
Gate1BB07 Marker 166.7 Cotton - Graimondii_physical - Gr_Chr09 Gate1BB07 Marker Cotton 29,803,115 - 29,803,796 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate1BB07 Marker 43 (cM) Automated name-based View Maps
Unig23E11 Marker 59.8 Cotton - Graimondii_physical - Gr_Chr09 Unig23E11 Marker Cotton 10,145,958 - 10,146,472 (bp) Automated name-based View Maps
Cotton - HDC - 5 Unig23E11 Marker 85.7 (cM) Automated name-based View Maps
Gafb17N07 Marker 65.1 Cotton - HDC - 5 Gafb17N07 Marker 85.3 (cM) Automated name-based View Maps
Cotton - PK - c10 Gafb17N07 Marker 45.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gafb17N07 Marker 135.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gafb17N07 Marker Cotton 3,561,815 - 3,562,413 (bp) Automated name-based View Maps
Unig23A04 Marker 60.7 Cotton - HDC - 5 Unig23A04 Marker 85.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig23A04 Marker Cotton 10,752,472 - 10,753,141 (bp) Automated name-based View Maps
G1386 Marker 57.1 Cotton - HDC - 5 G1386 Marker 85.9 (cM) Automated name-based View Maps
Unig22F05 Marker 107.1 Cotton - HDC - 5 Unig22F05 Marker 82.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig22F05 Marker Cotton 56,552,336 - 56,552,803 (bp) Automated name-based View Maps
G1137 Marker 10.6 Cotton - Graimondii_physical - Gr_Chr09 G1137 Marker Cotton 2,524,039 - 2,525,741 (bp) Automated name-based View Maps
Cotton - HDC - 5 G1137 Marker 105.7 (cM) Automated name-based View Maps
Unig06C12 Marker 65.1 Cotton - Graimondii_physical - Gr_Chr12 Unig06C12 Marker Cotton 21,985,873 - 21,986,515 (bp) Automated name-based View Maps
Cotton - HDC - 5 Unig06C12 Marker 85.3 (cM) Automated name-based View Maps
G1053 Marker 155.7 Cotton - HDC - 5 G1053 Marker 48.2 (cM) Automated name-based View Maps
Unig22C05 Marker 201.9 Cotton - HDC - 5 Unig22C05 Marker 26.4 (cM) Automated name-based View Maps
Cotton - HDC - 4 Unig22C05 Marker 53.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 Unig22C05 Marker 38.9 (cM) Automated name-based View Maps
Cotton - PK - c4 Unig22C05 Marker 130 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Unig22C05 Marker Cotton 47,356,618 - 47,357,266 (bp) Automated name-based View Maps
Cotton - HDC - 22 Unig22C05 Marker 19.2 (cM) Automated name-based View Maps
Cotton - PK - c22 Unig22C05 Marker 75.3 (cM) Automated name-based View Maps
Cotton - PK - D03 Unig22C05 Marker 29.6 (cM) Automated name-based View Maps
G1112 Marker 58 Cotton - PK - D08 G1112 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 G1112 Marker 85.8 (cM) Automated name-based View Maps
Cotton - HDC - 19 G1112 Marker 151 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 G1112 Marker Cotton 8,334,569 - 8,336,070 (bp) Automated name-based View Maps
Unig22D05 Marker 50.7 Cotton - Graimondii_physical - Gr_Chr09 Unig22D05 Marker Cotton 7,378,252 - 7,378,591 (bp) Automated name-based View Maps
Cotton - PK - D08 Unig22D05 Marker 56.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig22D05 Marker 86.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 Unig22D05 Marker 149.7 (cM) Automated name-based View Maps
Gate4DB07 Marker 76.9 Cotton - HDC - 5 Gate4DB07 Marker 84.5 (cM) Automated name-based View Maps
Gate4DC12 Marker 157.8 Cotton - Graimondii_physical - Gr_Chr09 Gate4DC12 Marker Cotton 44,133,824 - 44,133,985 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate4DC12 Marker 47.2 (cM) Automated name-based View Maps
LGA22 Marker 71.3 Cotton - PK - D08 LGA22 Marker 98.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 LGA22 Marker 84.9 (cM) Automated name-based View Maps
Cotton - HDC - 19 LGA22 Marker 116.2 (cM) Automated name-based View Maps
M16_085 Marker 16.9 Cotton - HDC - 5 M16_085 Marker 102.1 (cM) Automated name-based View Maps
M16_117 Marker 116.2 Cotton - Graimondii_physical - Gr_Chr04 M16_117 Marker Cotton 60,917,887 - 60,918,575 (bp) Automated name-based View Maps
Cotton - HDC - 5 M16_117 Marker 81.8 (cM) Automated name-based View Maps
NBS535 Marker 142.7 Cotton - Graimondii_physical - Gr_Chr09 NBS535 Marker Cotton 29,099,010 - 29,099,523 (bp) Automated name-based View Maps
Cotton - PK - D08 NBS535 Marker 175.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 NBS535 Marker 64.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 NBS535 Marker 62.6 (cM) Automated name-based View Maps
P05_02 Marker 162.7 Cotton - HDC - 5 P05_02 Marker 44.9 (cM) Automated name-based View Maps
P06_12 Marker 71.3 Cotton - Graimondii_physical - Gr_Chr13 P06_12 Marker Cotton 48,453,451 - 48,453,957 (bp) Automated name-based View Maps
Cotton - HDC - 5 P06_12 Marker 84.9 (cM) Automated name-based View Maps
P06_58 Marker 59.8 Cotton - HDC - 5 P06_58 Marker 85.7 (cM) Automated name-based View Maps
P12_20 Marker 99.1 Cotton - HDC - 5 P12_20 Marker 83 (cM) Automated name-based View Maps
Cotton - PK - c6 P12_20 Marker 8.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 P12_20 Marker 121.1 (cM) Automated name-based View Maps
PAR01C07 Marker 239.6 Cotton - HDC - 5 pAR01C07 Marker 11.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 pAR01C07 Marker 8.7 (cM) Automated name-based View Maps