CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c12
Map Start: 0 cM
Map Stop: 213.6 cM
Features by Type:
122 Marker
12 QTL
134 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 134.       Previous | of 6 | Next
Cotton - PK - c12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
P11_23 Marker 48.2 Cotton - HDC - 12 P11_23 Marker 80.8 (cM) Automated name-based View Maps
PAR01C06 Marker 141.7 Cotton - HDC - 26 pAR01C06 Marker 75.7 (cM) Automated name-based View Maps
Cotton - PK - c26 PAR01C06 Marker 89.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pAR01C06 Marker Cotton 35,713,631 - 35,714,307 (bp) Automated name-based View Maps
Cotton - HDC - 12 pAR01C06 Marker 45.1 (cM) Automated name-based View Maps
PAR06B11 Marker 150.4 Cotton - Graimondii_physical - Gr_Chr08 pAR06B11 Marker Cotton 33,582,810 - 33,583,269 (bp) Automated name-based View Maps
Cotton - HDC - 12 pAR06B11 Marker 43.4 (cM) Automated name-based View Maps
pAR1004 Marker 149.5 Cotton - Graimondii_physical - Gr_Chr08 pAR1004 Marker Cotton 14,473,256 - 14,474,082 (bp) Automated name-based View Maps
Cotton - HDC - 12 pAR1004 Marker 43.6 (cM) Automated name-based View Maps
pAR10F10 Marker 57.8 Cotton - Graimondii_physical - Gr_Chr08 pAR10F10 Marker Cotton 43,650,185 - 43,650,797 (bp) Automated name-based View Maps
Cotton - HDC - 12 pAR10F10 Marker 63.3 (cM) Automated name-based View Maps
Cotton - PK - c26 pAR10F10 Marker 79 (cM) Automated name-based View Maps
Cotton - HDC - 26 pAR10F10 Marker 88.4 (cM) Automated name-based View Maps
pAR177 Marker 213.6 Cotton - PK - c26 pAR177 Marker 157.4 (cM) Automated name-based View Maps
Cotton - GVc - 26 pAR177 Marker 128.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pAR177 Marker Cotton 1,216,647 - 1,217,123 (bp) Automated name-based View Maps
Cotton - HDC - 26 pAR177 Marker 15.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 pAR177 Marker 179 (cM) Automated name-based View Maps
Cotton - HDC - 12 pAR177 Marker 13.6 (cM) Automated name-based View Maps
pAR183 Marker 37.3 Cotton - HDC - 12 pAR183 Marker 90.4 (cM) Automated name-based View Maps
pAR244 Marker 56.3 Cotton - HDC - 12 pAR244 Marker 66 (cM) Automated name-based View Maps
PAR3_21 Marker 26.2 Cotton - HDC - 12 pAR03_21 Marker 98.2 (cM) Automated name-based View Maps
pAR4_14 Marker 40.3 Cotton - HDC - 26 pAR04_14 Marker 108.2 (cM) Automated name-based View Maps
Cotton - PK - c3 pAR4_14 Marker 80.2 (cM) Automated name-based View Maps
Cotton - GVc - 26 pAR04_14 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 pAR04_14 Marker 71.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 pAR04_14 Marker 88.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 pAR4_14 Marker 61.5 (cM) Automated name-based View Maps
pAR534 Marker 150.4 Cotton - Graimondii_physical - Gr_Chr08 pAR534 Marker Cotton 26,290,727 - 26,291,276 (bp) Automated name-based View Maps
Cotton - HDC - 12 pAR534 Marker 43.4 (cM) Automated name-based View Maps
pAR565 Marker 149.5 Cotton - HDC - 12 pAR565 Marker 43.6 (cM) Automated name-based View Maps
pAR999 Marker 43.8 Cotton - HDC - 12 pAR999 Marker 85.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pAR999 Marker Cotton 40,498,903 - 40,499,369 (bp) Automated name-based View Maps
pGH337 Marker 205.1 Cotton - Graimondii_physical - Gr_Chr08 pGH337 Marker Cotton 2,199,132 - 2,200,079 (bp) Automated name-based View Maps
Cotton - HDC - 12 pGH337 Marker 17.6 (cM) Automated name-based View Maps
pGH492 Marker 13.6 Cotton - Graimondii_physical - Gr_Chr08 pGH492 Marker Cotton 54,823,828 - 54,824,592 (bp) Automated name-based View Maps
Cotton - HDC - 12 pGH492 Marker 101.8 (cM) Automated name-based View Maps
pGH565 Marker 59 Cotton - HDC - 12 pGH565 Marker 59.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pGH565 Marker Cotton 43,302,432 - 43,302,909 (bp) Automated name-based View Maps
Cotton - HDC - 12 pGH565 Marker 61.1 (cM) Automated name-based View Maps
pGH711 Marker 5.9 Cotton - HDC - 12 pGH711 Marker 112.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pGH711 Marker Cotton 56,370,913 - 56,371,560 (bp) Automated name-based View Maps
pGH829 Marker 10.2 Cotton - Graimondii_physical - Gr_Chr08 pGH829 Marker Cotton 55,127,434 - 55,127,937 (bp) Automated name-based View Maps
Cotton - HDC - 12 pGH829 Marker 102.8 (cM) Automated name-based View Maps
pVNC190 Marker 161.3 Cotton - HDC - 12 pVNC190 Marker 38.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pVNC190 Marker Cotton 53,156,330 - 53,156,709 (bp) Automated name-based View Maps
PXP2_75 Marker 5.9 Cotton - PK - c26 PXP2_75 Marker 10.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 pXP2_75 Marker 112.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 pXP2_75 Marker 138.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 PXP2_75 Marker Cotton 55,909,767 - 55,910,237 (bp) Automated name-based View Maps
Unig06B09 Marker 146.8 Cotton - Graimondii_physical - Gr_Chr08 Unig06B09 Marker Cotton 27,811,392 - 27,812,032 (bp) Automated name-based View Maps
Cotton - HDC - 12 Unig06B09 Marker 44.1 (cM) Automated name-based View Maps
A1188 Marker 93.8 Cotton - Graimondii_physical - Gr_Chr07 A1188 Marker Cotton 49,376,170 - 49,376,846 (bp) Automated name-based View Maps
Cotton - HDC - 12 A1188 Marker 54.3 (cM) Automated name-based View Maps
Unig23F10 Marker 1.8 Cotton - Graimondii_physical - Gr_Chr08 Unig23F10 Marker Cotton 56,849,625 - 56,850,199 (bp) Automated name-based View Maps
Cotton - HDC - 12 Unig23F10 Marker 113.3 (cM) Automated name-based View Maps
A1252 Marker 26.2 Cotton - Graimondii_physical - Gr_Chr08 A1252 Marker Cotton 54,132,173 - 54,133,043 (bp) Automated name-based View Maps
Cotton - HDC - 12 A1252 Marker 98.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 A1252 Marker 26.7 (cM) Automated name-based View Maps
Cotton - GVc - 12 A1252 Marker 23.3 (cM) Automated name-based View Maps
Unig24C11 Marker 48.2 Cotton - Graimondii_physical - Gr_Chr03 Unig24C11 Marker Cotton 35,286,503 - 35,287,153 (bp) Automated name-based View Maps
Cotton - HDC - 12 Unig24C11 Marker 80.8 (cM) Automated name-based View Maps
Cotton - PK - c3 Unig24C11 Marker 67.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 Unig24C11 Marker 84.6 (cM) Automated name-based View Maps