CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c16
Map Start: 0 cM
Map Stop: 149.9 cM
Features by Type:
88 Marker
8 QTL
96 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 96.       Previous | of 4 | Next
Cotton - PK - c16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Coau2G19 Marker 95.3 Cotton - Graimondii_physical - Gr_Chr01 Coau2G19 Marker Cotton 7,839,989 - 7,840,592 (bp) Automated name-based View Maps
Cotton - HDC - 16 Coau2G19 Marker 85.5 (cM) Automated name-based View Maps
Coau3J21 Marker 59 Cotton - HDC - 16 Coau3J21 Marker 53.3 (cM) Automated name-based View Maps
ESTS126 Marker 109.2 Cotton - Graimondii_physical - Gr_Chr01 ESTS126 Marker Cotton 5,768,683 - 5,769,266 (bp) Automated name-based View Maps
Cotton - HDC - 16 ESTS126 Marker 96 (cM) Automated name-based View Maps
G1158 Marker 125.3 Cotton - Graimondii_physical - Gr_Chr01 G1158 Marker Cotton 2,812,961 - 2,813,502 (bp) Automated name-based View Maps
Cotton - HDC - 16 G1158 Marker 108.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 G1158 Marker 189.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 G1158 Marker 205 (cM) Automated name-based View Maps
Cotton - HDC - 7 G1158 Marker 131.7 (cM) Automated name-based View Maps
Cotton - GVc - 7 G1158 Marker 106.3 (cM) Automated name-based View Maps
Cotton - GVc - 16 G1158 Marker 110.5 (cM) Automated name-based View Maps
Cotton - PK - c7 G1158 Marker 196.9 (cM) Automated name-based View Maps
G1271 Marker 39.4 Cotton - HDC - 16 G1271 Marker 36.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 G1271 Marker Cotton 46,032,710 - 46,033,699 (bp) Automated name-based View Maps
Gate1AB03 Marker 123.5 Cotton - HDC - 16 Gate1AB03 Marker 106.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate1AB03 Marker Cotton 18,921,619 - 18,922,086 (bp) Automated name-based View Maps
Gate1AH04 Marker 73.6 Cotton - HDC - 16 Gate1AH04 Marker 67.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gate1AH04 Marker 88.8 (cM) Automated name-based View Maps
Cotton - PK - c7 Gate1AH04 Marker 145.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Gate1AH04 Marker Cotton 15,106,663 - 15,107,132 (bp) Automated name-based View Maps
Gate2BF11 Marker 84.3 Cotton - PK - A01 Gate2BF11 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gate2BF11 Marker 77.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate2BF11 Marker 118.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Gate2BF11 Marker Cotton 22,071,630 - 22,072,008 (bp) Automated name-based View Maps
Gate3BA10 Marker 116.1 Cotton - Graimondii_physical - Gr_Chr01 Gate3BA10 Marker Cotton 5,240,366 - 5,241,079 (bp) Automated name-based View Maps
Cotton - HDC - 16 Gate3BA10 Marker 101.2 (cM) Automated name-based View Maps
Gate4BF05 Marker 116.1 Cotton - Graimondii_physical - Gr_Chr01 Gate4BF05 Marker Cotton 4,550,851 - 4,551,645 (bp) Automated name-based View Maps
Cotton - HDC - 16 Gate4BF05 Marker 101.2 (cM) Automated name-based View Maps
Gate4CB01 Marker 55.9 Cotton - HDC - 16 Gate4CB01 Marker 50.6 (cM) Automated name-based View Maps
Gate4CF04 Marker 149.9 Cotton - Graimondii_physical - Gr_Chr01 Gate4CF04 Marker Cotton 1,218,755 - 1,219,472 (bp) Automated name-based View Maps
Cotton - HDC - 16 Gate4CF04 Marker 126.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gate4CF04 Marker 128.6 (cM) Automated name-based View Maps
P01_24 Marker 4.8 Cotton - Graimondii_physical - Gr_Chr04 P01_24 Marker Cotton 7,352,094 - 7,352,873 (bp) Automated name-based View Maps
Cotton - PK - A03 P01_24 Marker 109.8 (cM) Automated name-based View Maps
Cotton - HDC - 11 P01_24 Marker 107 (cM) Automated name-based View Maps
Cotton - HDC - 16 P01_24 Marker 7.3 (cM) Automated name-based View Maps
P03_02 Marker 95.3 Cotton - HDC - 16 P03_02 Marker 85.5 (cM) Automated name-based View Maps
PAR03C09 Marker 74.4 Cotton - HDC - 16 pAR03C09 Marker 68.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pAR03C09 Marker Cotton 37,109,853 - 37,110,607 (bp) Automated name-based View Maps
PAR06A09 Marker 88.7 Cotton - PK - c7 PAR06A09 Marker 169.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR06A09 Marker 80.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR06A09 Marker 106.8 (cM) Automated name-based View Maps
pAR161 Marker 51.2 Cotton - HDC - 16 pAR161 Marker 46.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pAR161 Marker Cotton 57,099,885 - 57,101,199 (bp) Automated name-based View Maps
pAR173 Marker 52.8 Cotton - HDC - 16 pAR173 Marker 47.9 (cM) Automated name-based View Maps
Cotton - PK - c7 pAR173 Marker 119.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR173 Marker 62.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR173 Marker 39.4 (cM) Automated name-based View Maps
pAR231 Marker 53.7 Cotton - HDC - 16 pAR231 Marker 48.7 (cM) Automated name-based View Maps
pAR291 Marker 52.8 Cotton - PK - c7 pAR291 Marker 96.1 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR291 Marker 47.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR291 Marker 52.4 (cM) Automated name-based View Maps
pAR324 Marker 75.3 Cotton - Graimondii_physical - Gr_Chr01 pAR324 Marker Cotton 14,722,953 - 14,723,085 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR324 Marker 69 (cM) Automated name-based View Maps
pAR4_09 Marker 0 No other positions
pAR512 Marker 58.1 Cotton - HDC - 16 pAR512 Marker 52.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR512 Marker Cotton 23,993,547 - 23,994,304 (bp) Automated name-based View Maps
pAR564 Marker 93.5 Cotton - HDC - 16 pAR564 Marker 84.2 (cM) Automated name-based View Maps
pAR624 Marker 91.4 Cotton - HDC - 16 pAR624 Marker 82.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR624 Marker 106.8 (cM) Automated name-based View Maps
Cotton - PK - c7 pAR624 Marker 169.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 pAR624 Marker Cotton 55,767,768 - 55,767,957 (bp) Automated name-based View Maps