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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-PK
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Maps c16
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
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Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c16
Map Start: 0 cM
Map Stop: 149.9 cM
Features by Type:
88 Marker
8 QTL
96 Total

Map Features

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Items 76 to 96 of 96.       Previous | of 4
Cotton - PK - c16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pAR662 Marker 116.1 Cotton - Graimondii_physical - Gr_Chr01 pAR662 Marker Cotton 4,264,584 - 4,264,815 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR662 Marker 101.2 (cM) Automated name-based View Maps
pAR720 Marker 116.1 Cotton - Graimondii_physical - Gr_Chr01 pAR720 Marker Cotton 3,769,569 - 3,770,106 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR720 Marker 101.2 (cM) Automated name-based View Maps
pAR825 Marker 76.2 Cotton - HDC - 19 pAR825 Marker 149.7 (cM) Automated name-based View Maps
Cotton - GVc - 19 pAR825 Marker 40.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 pAR825 Marker 47.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR825 Marker 69.9 (cM) Automated name-based View Maps
Cotton - PK - D08 pAR825 Marker 56.1 (cM) Automated name-based View Maps
pAR869 Marker 87.8 Cotton - Graimondii_physical - Gr_Chr01 pAR869 Marker Cotton 11,322,025 - 11,322,971 (bp) Automated name-based View Maps
Cotton - HDC - 16 pAR869 Marker 79.9 (cM) Automated name-based View Maps
pAR934 Marker 139.7 Cotton - PK - c6 pAR934 Marker 44.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 pAR934 Marker 103.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 pAR934 Marker Cotton 40,278,912 - 40,279,549 (bp) Automated name-based View Maps
Cotton - GVc - 13 pAR934 Marker 60.3 (cM) Automated name-based View Maps
Cotton - GVc - 7 pAR934 Marker 27.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 pAR934 Marker 74.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR934 Marker 58.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 pAR934 Marker 97.1 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR934 Marker 120.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR934 Marker 71.6 (cM) Automated name-based View Maps
pAR997 Marker 101.2 Cotton - HDC - 16 pAR997 Marker 90 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 pAR997 Marker Cotton 6,080,112 - 6,080,931 (bp) Automated name-based View Maps
pGH408 Marker 93.5 Cotton - PK - c7 pGH408 Marker 169.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 pGH408 Marker 84.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 pGH408 Marker 106.8 (cM) Automated name-based View Maps
PVNC030 Marker 81.5 Cotton - HDC - 16 pVNC030 Marker 75 (cM) Automated name-based View Maps
Cotton - PK - c7 PVNC030 Marker 159.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 pVNC030 Marker 102 (cM) Automated name-based View Maps
Unig06D05 Marker 45 Cotton - HDC - 16 Unig06D05 Marker 41.3 (cM) Automated name-based View Maps
Unig23G04 Marker 86 Cotton - HDC - 16 Unig23G04 Marker 78.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Unig23G04 Marker Cotton 10,724,105 - 10,724,758 (bp) Automated name-based View Maps
Unig25B05 Marker 97 Cotton - HDC - 16 Unig25B05 Marker 86.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Unig25B05 Marker Cotton 6,856,521 - 6,857,186 (bp) Automated name-based View Maps
Unig26E07 Marker 14.1 Cotton - HDC - 7 Unig26E07 Marker 15.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 Unig26E07 Marker 15.1 (cM) Automated name-based View Maps
Cotton - PK - c7 Unig26E07 Marker 23.2 (cM) Automated name-based View Maps
Unig28E03 Marker 58.1 Cotton - HDC - 16 Unig28E03 Marker 52.4 (cM) Automated name-based View Maps
FL16.1 QTL 45 - 49.3 No other positions
FU16.1(FLU) QTL 34.9 - 49.9 No other positions
OP16.1(BT) QTL 52.8 - 52.9 No other positions
CT16.2(BT) QTL 24.1 - 57.4 No other positions
FF16.1 QTL 49.3 - 55.5 No other positions
FS16.1 QTL 34.9 - 45.7 No other positions
MIC16.1 QTL 49.9 - 68.5 No other positions
CT16.1(BT) QTL 52.8 - 52.9 No other positions