CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c20
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c20
Map Start: 0 cM
Map Stop: 146 cM
Features by Type:
93 Marker
12 QTL
105 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 105.       Previous | of 5 | Next
Cotton - PK - c20
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate3BF11 Marker 60.4 Cotton - Graimondii_physical - Gr_Chr11 Gate3BF11 Marker Cotton 8,302,473 - 8,303,215 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate3BF11 Marker 106.7 (cM) Automated name-based View Maps
Gate3DD01 Marker 55.7 Cotton - HDC - 20 Gate3DD01 Marker 112.3 (cM) Automated name-based View Maps
Gate4AF02 Marker 133.3 Cotton - Graimondii_physical - Gr_Chr11 Gate4AF02 Marker Cotton 60,150,047 - 60,150,888 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate4AF02 Marker 33 (cM) Automated name-based View Maps
Gate4BA10 Marker 45.7 Cotton - PK - c10 Gate4BA10 Marker 48.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate4BA10 Marker 123.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate4BA10 Marker 133.4 (cM) Automated name-based View Maps
Gate4BD12 Marker 86 Cotton - HDC - 20 Gate4BD12 Marker 79.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate4BD12 Marker Cotton 30,077,694 - 30,078,497 (bp) Automated name-based View Maps
Gate4CF10 Marker 87.6 Cotton - HDC - 2 Gate4CF10 Marker 84.5 (cM) Automated name-based View Maps
Cotton - PK - c2 Gate4CF10 Marker 55.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate4CF10 Marker 78 (cM) Automated name-based View Maps
P05_57 Marker 77.6 Cotton - HDC - 20 P05_57 Marker 86.2 (cM) Automated name-based View Maps
P06_57 Marker 6.1 Cotton - HDC - 11 P06_57 Marker 21.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 P06_57 Marker Cotton 38,583,406 - 38,583,998 (bp) Automated name-based View Maps
Cotton - HDC - 20 P06_57 Marker 150.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 P06_57 Marker 44 (cM) Automated name-based View Maps
Cotton - PK - A03 P06_57 Marker 198 (cM) Automated name-based View Maps
Cotton - PK - D02 P06_57 Marker 187.5 (cM) Automated name-based View Maps
P12_19 Marker 145.9 Cotton - PK - c10 P12_19 Marker 182.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 P12_19 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 20 P12_19 Marker 23.6 (cM) Automated name-based View Maps
PAR04A09 Marker 120.1 Cotton - HDC - 20 pAR04A09 Marker 42.8 (cM) Automated name-based View Maps
PAR09D03 Marker 98 Cotton - PK - c10 PAR09D03 Marker 124.2 (cM) Automated name-based View Maps
Cotton - HDC - 20 pAR09D03 Marker 66.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 pAR09D03 Marker 63.6 (cM) Automated name-based View Maps
pAR827 Marker 102.5 Cotton - Guazuncho2xVH8-BC1 - c20 pAR827 Marker 192.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 pAR827 Marker 61.8 (cM) Automated name-based View Maps
Cotton - GVc - 20 pAR827 Marker 117.1 (cM) Automated name-based View Maps
pAR891 Marker 77.6 Cotton - HDC - 20 pAR891 Marker 86.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 pAR891 Marker Cotton 20,918,808 - 20,919,009 (bp) Automated name-based View Maps
pAR956 Marker 90.1 Cotton - HDC - 20 pAR956 Marker 75.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 pAR956 Marker Cotton 28,829,227 - 28,829,629 (bp) Automated name-based View Maps
pGH270 Marker 63.1 Cotton - Graimondii_physical - Gr_Chr11 pGH270 Marker Cotton 9,858,533 - 9,859,365 (bp) Automated name-based View Maps
Cotton - HDC - 20 pGH270 Marker 103.5 (cM) Automated name-based View Maps
pGH298 Marker 65.2 Cotton - Graimondii_physical - Gr_Chr11 pGH298 Marker Cotton 11,807,072 - 11,808,116 (bp) Automated name-based View Maps
Cotton - HDC - 20 pGH298 Marker 101 (cM) Automated name-based View Maps
pGH404 Marker 55.7 Cotton - HDC - 20 pGH404 Marker 112.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 pGH404 Marker Cotton 6,553,413 - 6,553,725 (bp) Automated name-based View Maps
pGH439 Marker 86 Cotton - Graimondii_physical - Gr_Chr11 pGH439 Marker Cotton 29,182,860 - 29,183,525 (bp) Automated name-based View Maps
Cotton - HDC - 20 pGH439 Marker 79.3 (cM) Automated name-based View Maps
pGH700 Marker 94.6 Cotton - Graimondii_physical - Gr_Chr11 pGH700 Marker Cotton 49,722,365 - 49,723,153 (bp) Automated name-based View Maps
Cotton - HDC - 20 pGH700 Marker 70.4 (cM) Automated name-based View Maps
Cotton - PK - c10 pGH700 Marker 107.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 pGH700 Marker 79.2 (cM) Automated name-based View Maps
pVNC163 Marker 77.6 Cotton - GVc - 3 pVNC163 Marker 94.8 (cM) Automated name-based View Maps
Cotton - PK - c10 pVNC163 Marker 85.2 (cM) Automated name-based View Maps
Cotton - HDC - 20 pVNC163 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 pVNC163 Marker 98.4 (cM) Automated name-based View Maps
Cotton - HDC - 3 pVNC163 Marker 27.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 pVNC163 Marker 105.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 pVNC163 Marker Cotton 22,482,522 - 22,482,644 (bp) Automated name-based View Maps
PXP4_66 Marker 89.2 Cotton - HDC - 20 pXP4_66 Marker 76.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 PXP4_66 Marker Cotton 36,052,460 - 36,053,096 (bp) Automated name-based View Maps
Unig06E10 Marker 89.2 Cotton - Graimondii_physical - Gr_Chr11 Unig06E10 Marker Cotton 45,545,231 - 45,545,889 (bp) Automated name-based View Maps
Cotton - HDC - 20 Unig06E10 Marker 76.2 (cM) Automated name-based View Maps
Unig22B09 Marker 63.1 Cotton - HDC - 20 Unig22B09 Marker 103.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig22B09 Marker Cotton 10,306,630 - 10,307,261 (bp) Automated name-based View Maps
Unig23D03 Marker 80.5 Cotton - HDC - 20 Unig23D03 Marker 83.8 (cM) Automated name-based View Maps
Cotton - PK - c3 Unig23D03 Marker 78.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig23D03 Marker Cotton 23,857,423 - 23,858,083 (bp) Automated name-based View Maps
Cotton - HDC - 3 Unig23D03 Marker 73.1 (cM) Automated name-based View Maps
Unig23F01 Marker 77.6 Cotton - HDC - 20 Unig23F01 Marker 86.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig23F01 Marker Cotton 22,457,371 - 22,457,815 (bp) Automated name-based View Maps