CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c25
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c25
Map Start: 0 cM
Map Stop: 159.9 cM
Features by Type:
86 Marker
11 QTL
97 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 97.       Previous | of 4 | Next
Cotton - PK - c25
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pAR4_30 Marker 5.6 Cotton - HDC - 25 pAR04_30 Marker 149.3 (cM) Automated name-based View Maps
pAR415 Marker 148.7 Cotton - Graimondii_physical - Gr_Chr10 pAR415 Marker Cotton 61,169,087 - 61,169,878 (bp) Automated name-based View Maps
Cotton - HDC - 25 pAR415 Marker 15.1 (cM) Automated name-based View Maps
pAR445 Marker 5.2 Cotton - Graimondii_physical - Gr_Chr10 pAR445 Marker Cotton 865,226 - 865,599 (bp) Automated name-based View Maps
Cotton - HDC - 25 pAR445 Marker 149.6 (cM) Automated name-based View Maps
pAR574 Marker 159.9 Cotton - HDC - 25 pAR574 Marker 6.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 pAR574 Marker 186.4 (cM) Automated name-based View Maps
Cotton - PK - c6 pAR574 Marker 114 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pAR574 Marker Cotton 70,227,279 - 70,228,370 (bp) Automated name-based View Maps
Cotton - HDC - 6 pAR574 Marker 12.7 (cM) Automated name-based View Maps
pAR893 Marker 93.8 Cotton - HDC - 25 pAR893 Marker 78.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pAR893 Marker Cotton 25,387,703 - 25,388,207 (bp) Automated name-based View Maps
pAR969 Marker 66.6 Cotton - Graimondii_physical - Gr_Chr10 pAR969 Marker Cotton 8,787,463 - 8,787,886 (bp) Automated name-based View Maps
Cotton - HDC - 25 pAR969 Marker 102.5 (cM) Automated name-based View Maps
pAR981 Marker 112.7 Cotton - Graimondii_physical - Gr_Chr07 pAR981 Marker Cotton 50,389,359 - 50,389,557 (bp) Automated name-based View Maps
Cotton - HDC - 25 pAR981 Marker 49.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 pAR981 Marker 50.7 (cM) Automated name-based View Maps
pGH309 Marker 81.1 Cotton - GVc - 25 pGH309 Marker 64.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pGH309 Marker Cotton 13,731,588 - 13,732,463 (bp) Automated name-based View Maps
Cotton - HDC - 25 pGH309 Marker 85.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 pGH309 Marker 78.9 (cM) Automated name-based View Maps
pGH691 Marker 80.4 Cotton - HDC - 25 pGH691 Marker 86.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pGH691 Marker Cotton 12,367,446 - 12,367,954 (bp) Automated name-based View Maps
PXP1_01 Marker 98.9 Cotton - Graimondii_physical - Gr_Chr10 PXP1_01 Marker Cotton 28,291,759 - 28,292,702 (bp) Automated name-based View Maps
Cotton - HDC - 25 pXP1_01 Marker 77.4 (cM) Automated name-based View Maps
PXP3_46 Marker 7.8 Cotton - HDC - 25 pXP3_46 Marker 147.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 PXP3_46 Marker Cotton 1,702,775 - 1,703,647 (bp) Automated name-based View Maps
PXP4_18 Marker 48 Cotton - HDC - 25 pXP4_18 Marker 120.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 PXP4_18 Marker Cotton 5,133,847 - 5,134,156 (bp) Automated name-based View Maps
Unig06F04 Marker 49.7 Cotton - HDC - 25 Unig06F04 Marker 119.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Unig06F04 Marker Cotton 11,738,894 - 11,739,563 (bp) Automated name-based View Maps
Unig23A07 Marker 132.6 Cotton - HDC - 25 Unig23A07 Marker 27.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Unig23A07 Marker Cotton 60,676,736 - 60,677,356 (bp) Automated name-based View Maps
Unig24C12 Marker 132.8 Cotton - HDC - 25 Unig24C12 Marker 29.5 (cM) Automated name-based View Maps
Cotton - HDC - 25 Unig24C12 Marker 27.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Unig24C12 Marker Cotton 59,570,420 - 59,571,052 (bp) Automated name-based View Maps
Unig24E11 Marker 106 Cotton - Graimondii_physical - Gr_Chr01 Unig24E11 Marker Cotton 1,380,582 - 1,381,207 (bp) Automated name-based View Maps
Cotton - HDC - 25 Unig24E11 Marker 64.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 Unig24E11 Marker 122.7 (cM) Automated name-based View Maps
Cotton - PK - c16 Unig24E11 Marker 142.8 (cM) Automated name-based View Maps
Unig25H10 Marker 107.3 Cotton - PK - c10 Unig25H10 Marker 23.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 Unig25H10 Marker 153.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 Unig25H10 Marker 61.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Unig25H10 Marker Cotton 52,532,666 - 52,533,315 (bp) Automated name-based View Maps
Unig26G04 Marker 72.1 Cotton - HDC - 25 Unig26G04 Marker 101.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 Unig26G04 Marker 96 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Unig26G04 Marker Cotton 11,662,456 - 11,663,129 (bp) Automated name-based View Maps
A1215 Marker 12.6 Cotton - GVc - 6 A1215 Marker 24.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 A1215 Marker 16 (cM) Automated name-based View Maps
Cotton - PK - c6 A1215 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 6 A1215 Marker 126.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 A1215 Marker 142.8 (cM) Automated name-based View Maps
A1742 Marker 96.5 Cotton - PK - c6 A1742 Marker 58 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 A1742 Marker Cotton 29,847,469 - 29,848,796 (bp) Automated name-based View Maps
Cotton - HDC - 6 A1742 Marker 88.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 A1742 Marker 77.9 (cM) Automated name-based View Maps
BNL1153 Marker 88.1 Cotton - PK - c6 BNL1153 Marker 49.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1153 Marker 69.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1153 Marker 50.7 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1153 Marker 80.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1153 Marker 79.5 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1153 Marker 74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1153 Marker 90 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1153 Marker 79.7 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1153 Marker 93.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1153 Marker Cotton 19,375,282 - 19,375,657 (bp) Automated name-based View Maps
BNL1440 Marker 84.6 Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1440 Marker 65.31 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1440 Marker 101.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1440 Marker 83.8 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1440 Marker 83.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Coau1G15 Marker 153.7 Cotton - Graimondii_physical - Gr_Chr10 Coau1G15 Marker Cotton 61,666,007 - 61,666,663 (bp) Automated name-based View Maps
Cotton - HDC - 25 Coau1G15 Marker 11.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 Coau1G15 Marker 6.8 (cM) Automated name-based View Maps
Coau1L16 Marker 79.3 Cotton - HDC - 25 Coau1L16 Marker 87.4 (cM) Automated name-based View Maps
coau3B05 Marker 7.8 Cotton - HDC - 25 Coau3B05 Marker 147.2 (cM) Automated name-based View Maps
Cotton - PK - c3 Coau3B05 Marker 71.7 (cM) Automated name-based View Maps
Cotton - HDC - 3 Coau3B05 Marker 79.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Coau3B05 Marker Cotton 16,306,348 - 16,307,152 (bp) Automated name-based View Maps