CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-SSR_SNP_consensus_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - SSR_SNP_consensus_map [ View Map Set Info ]
Map Name: LG9
Map Start: 0 cM
Map Stop: 100.9 cM
Features by Type:
182 Marker
182 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 101 to 125 of 182.       Previous | of 8 | Next
Cocoa - SSR_SNP_consensus_map - LG9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mTcCIR145 Marker 93 Cocoa - ref_UPA402xUF676 - LG9 mTcCIR145 Marker 94.8 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR145 Marker 27,796,100 - 27,796,392 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR145 Marker 94.8 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR145 Marker 94.8 (cM) Automated name-based View Maps
TcSNP210 Marker 20.6 Cocoa - Physical map - Tc09 TcSNP210 Marker 4,055,976 - 4,056,872 (bp) Automated name-based View Maps
mTcCIR429 Marker 69.7 Cocoa - Physical map - Tc09 mTcCIR429 Marker 24,790,350 - 24,792,632 (bp) Automated name-based View Maps
TcSNP895 Marker 13.4 Cocoa - Physical map - Tc09 TcSNP895 Marker 2,456,736 - 2,458,699 (bp) Automated name-based View Maps
mTcCIR008 Marker 48.5 Cocoa - SSR_SNP_consensus_map - LG3 mTcCIR040 Marker 17.1 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG1 mTcCIR022 Marker 86.5 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG7 mTcCIR007 Marker 27.4 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG6 mTcCIR006 Marker 4.5 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG2 mTcCIR011 Marker 89.4 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR008 Marker 16,150,436 - 16,150,838 (bp) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG1 mTcCIR015 Marker 16.2 (cM) Automated name-based View Maps
Cocoa - SSR_SNP_consensus_map - LG10 mTcCIR037 Marker 56.1 (cM) Automated name-based View Maps
TcSNP416 Marker 62.5 Cocoa - Physical map - Tc09 TcSNP416 Marker 23,327,760 - 23,329,079 (bp) Automated name-based View Maps
TcSNP192 Marker 79.4 Cocoa - Physical map - Tc09 TcSNP192 Marker 26,641,887 - 26,643,621 (bp) Automated name-based View Maps
TcSNP1170 Marker 32.9 Cocoa - Physical map - Tc09 TcSNP1170 Marker 7,085,380 - 7,086,306 (bp) Automated name-based View Maps
TcSNP932 Marker 7.3 Cocoa - Physical map - Tc09 TcSNP932 Marker 1,471,961 - 1,473,178 (bp) Automated name-based View Maps
TcSNP465 Marker 51.3 Cocoa - Physical map - Tc09 TcSNP465 Marker 19,767,222 - 19,767,844 (bp) Automated name-based View Maps
mTcCIR85 Marker 88.4 Cocoa - test - LG9 mTcCIR85 Marker 89.8 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR85 Marker 89.8 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR85 Marker 89.8 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR85 Marker 3.4 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR85 Marker 27,557,360 - 27,557,729 (bp) Automated name-based View Maps
mTcCIR293 Marker 43.3 Cocoa - Physical map - Tc09 mTcCIR293 Marker 11,463,419 - 11,464,469 (bp) Automated name-based View Maps
TcSNP618 Marker 69.1 Cocoa - Physical map - Tc09 TcSNP618 Marker 23,908,550 - 23,910,731 (bp) Automated name-based View Maps
TcSNP757 Marker 20.3 Cocoa - Physical map - Tc09 TcSNP757 Marker 3,816,218 - 3,820,595 (bp) Automated name-based View Maps
mTcCIR212 Marker 61.3 Cocoa - ref_UPA402xUF676 - LG9 mTcCIR212 Marker 61 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR212 Marker 61 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR212 Marker 21,920,113 - 21,920,674 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR212 Marker 61 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR212 Marker 32.7 (cM) Automated name-based View Maps
mTcCIR285 Marker 12.9 Cocoa - Physical map - Tc09 mTcCIR285 Marker 2,249,409 - 2,249,967 (bp) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR285 Marker 16.3 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR285 Marker 16.3 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR285 Marker 16.3 (cM) Automated name-based View Maps
mTcCIR513 Marker 48.4 No other positions
cTcCIR95 Marker 31.9 Cocoa - consensus_disease_res - LG9 cTcCIR95 Marker 32.4 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 cTcCIR95 Marker 32.4 (cM) Automated name-based View Maps
Cocoa - test - LG9 cTcCIR95 Marker 32.4 (cM) Automated name-based View Maps
TcSNP621 Marker 78.6 Cocoa - Physical map - Tc09 TcSNP621 Marker 26,282,327 - 26,283,751 (bp) Automated name-based View Maps
TcSNP663 Marker 68.8 Cocoa - Physical map - Tc09 TcSNP663 Marker 24,417,872 - 24,418,931 (bp) Automated name-based View Maps
TcSNP614 Marker 7.2 Cocoa - Physical map - Tc09 TcSNP614 Marker 1,532,244 - 1,533,563 (bp) Automated name-based View Maps
TcSNP81 Marker 51 Cocoa - Physical map - Tc09 TcSNP81 Marker 19,076,213 - 19,076,858 (bp) Automated name-based View Maps
mTcCIR339 Marker 41.6 Cocoa - Physical map - Tc09 mTcCIR339 Marker 10,932,941 - 10,934,635 (bp) Automated name-based View Maps
TcSNP1000 Marker 86 Cocoa - Physical map - Tc09 TcSNP1000 Marker 27,087,617 - 27,089,849 (bp) Automated name-based View Maps
TcSNP502 Marker 19.1 Cocoa - Physical map - Tc09 TcSNP502 Marker 3,814,494 - 3,815,697 (bp) Automated name-based View Maps