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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 3
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 116.37 cM
Features by Type:
88 Marker
88 Total

Map Features

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Items 26 to 50 of 88.       Previous | of 4 | Next
Cotton - T3 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR245 Marker 40.75 Cotton - Guazuncho2xVH8-BC1 - c3 CIR245 Marker 94.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR245 Marker 49.2 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR245 Marker 73 (cM) Automated name-based View Maps
BNL3463 Marker 42.48 Cotton - GVc - 3 BNL3463 Marker 66.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3463 Marker 46.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3463 Marker 51.7 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3463 Marker 30.1 (cM) Automated name-based View Maps
BNL3034 Marker 43.08 Cotton - HDC - 3 BNL3034 Marker 52.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3034 Marker 52.8 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3034 Marker 120.6 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL3034 Marker 22.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3034 Marker 50 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL3034 Marker Cotton 56,263,217 - 56,263,405 (bp) Automated name-based View Maps
Cotton - PK - c14 BNL3034 Marker 104.1 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL3034 Marker 54.2 (cM) Automated name-based View Maps
NAU1068 Marker 43.27 Cotton - HDC - 3 NAU1068 Marker 52.4 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1068 Marker 18.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU1068 Marker Cotton 56,289,822 - 56,290,462 (bp) Automated name-based View Maps
DPL0605 Marker 43.53 Cotton - Graimondii_physical - Gr_Chr05 DPL0605 Marker Cotton 56,253,821 - 56,254,498 (bp) Automated name-based View Maps
Cotton - HDC - 3 DPL0605 Marker 52.6 (cM) Automated name-based View Maps
Cotton - E3 - 3 DPL0605 Marker 105.7 (cM) Automated name-based View Maps
UCcg10550_118 Marker 44.92 Cotton - HDC - 3 UCcg10550_118 Marker 53.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcg10550_118 Marker Cotton 55,043,613 - 55,043,715 (bp) Automated name-based View Maps
NAU1248 Marker 45.76 Cotton - CH - 3 NAU1248 Marker 23.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 NAU1248 Marker 54.8 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1248 Marker 18.1 (cM) Automated name-based View Maps
Cotton - CH - 3 NAU1248 Marker 25 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU1248 Marker Cotton 54,818,067 - 54,818,589 (bp) Automated name-based View Maps
BNL0226 Marker 46.98 Cotton - CH - 14 BNL0226 Marker 130.8 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL0226 Marker 104.2 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL0226 Marker 78.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL0226a Marker 68.19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL0226b Marker 42.12 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL0226 Marker 120 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL226 Marker 99.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL0226 Marker Cotton 53,481,303 - 53,481,585 (bp) Automated name-based View Maps
Cotton - PK - c3 BNL0226 Marker 96.9 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0226 Marker 53.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL226 Marker 67.6 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL0226 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL226 Marker 82.5 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL0226 Marker 16.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL226 Marker 99 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL0226 Marker 55.9 (cM) Automated name-based View Maps
MUSB0639 Marker 47.39 Cotton - Graimondii_physical - Gr_Chr05 MUSB0639 Marker Cotton 54,395,428 - 54,396,334 (bp) Automated name-based View Maps
Cotton - HDC - 3 MUSB0639 Marker 56.3 (cM) Automated name-based View Maps
UCcg10916_67 Marker 47.78 Cotton - HDC - 3 UCcg10916_67 Marker 56.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcg10916_67 Marker Cotton 53,498,597 - 53,498,699 (bp) Automated name-based View Maps
DPL0631 Marker 47.94 Cotton - E3 - 3 DPL0631 Marker 104.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 DPL0631 Marker 56.8 (cM) Automated name-based View Maps
BNL4034 Marker 49.89 Cotton - HDC - 3 BNL4034 Marker 59 (cM) Automated name-based View Maps
TMB1314 Marker 50.93 Cotton - HDC - 3 TMB1314 Marker 60.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 TMB1314 Marker 131.9 (cM) Automated name-based View Maps
Cotton - HDC - 5 TMB1314 Marker 43.6 (cM) Automated name-based View Maps
Gh129 Marker 53.19 Cotton - Graimondii_physical - Gr_Chr05 Gh129 Marker Cotton 49,433,295 - 49,433,986 (bp) Automated name-based View Maps
Cotton - E3 - 3 Gh129 Marker 97.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 Gh129 Marker 62.6 (cM) Automated name-based View Maps
DOW073 Marker 54.75 Cotton - HDC - 3 DOW073 Marker 64.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 DOW073 Marker Cotton 68,874,597 - 68,874,853 (bp) Automated name-based View Maps
Gh681 Marker 55.21 Cotton - T3 - 13 Gh681 Marker 39.19 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU445 Marker 64.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 CLU445 Marker 36.2 (cM) Automated name-based View Maps
Cotton - E3 - 3 Gh681 Marker 93 (cM) Automated name-based View Maps
Cotton - E3 - 13 Gh681 Marker 154.8 (cM) Automated name-based View Maps
MUSB1220 Marker 55.66 Cotton - Graimondii_physical - Gr_Chr13 MUSB1220 Marker Cotton 17,993,470 - 17,993,897 (bp) Automated name-based View Maps
Cotton - HDC - 3 MUSB1220 Marker 65.3 (cM) Automated name-based View Maps
MUCS282 Marker 56.58 Cotton - HDC - 3 MUCS282 Marker 66.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 MUCS282 Marker Cotton 17,422,005 - 17,423,695 (bp) Automated name-based View Maps
MUSS172 Marker 57.45 Cotton - HDC - 3 CLU1372 Marker 68 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1372 Marker 67.1 (cM) Automated name-based View Maps
Cotton - E3 - 3 MUSS172 Marker 97.5 (cM) Automated name-based View Maps
DOW100 Marker 57.83 Cotton - HDC - 3 DOW100 Marker 67.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DOW100 Marker Cotton 44,096,381 - 44,096,631 (bp) Automated name-based View Maps
NAU1190 Marker 58.2 Cotton - HDC - 3 CLU1372 Marker 67.1 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1190 Marker 20.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1372 Marker 68 (cM) Automated name-based View Maps
DPL0733 Marker 58.37 Cotton - HDC - 3 DPL0733 Marker 68.2 (cM) Automated name-based View Maps
Cotton - E3 - 3 DPL0733 Marker 101.3 (cM) Automated name-based View Maps
DPL0170 Marker 58.51 Cotton - HDC - 3 DPL0170 Marker 68.3 (cM) Automated name-based View Maps
BNL3398 Marker 58.75 Cotton - Graimondii_physical - Gr_Chr10 BNL3398 Marker Cotton 39,850,114 - 39,851,025 (bp) Automated name-based View Maps
Cotton - E3 - 3 BNL3398 Marker 97.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3398 Marker 68.5 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3398 Marker 4.2 (cM) Automated name-based View Maps
UCcg10469_98 Marker 58.88 Cotton - HDC - 3 UCcg10469_98 Marker 68.7 (cM) Automated name-based View Maps