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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 7
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 128.91 cM
Features by Type:
86 Marker
86 Total

Map Features

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Items 26 to 50 of 86.       Previous | of 4 | Next
Cotton - T3 - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MUSB0859 Marker 112.55 Cotton - HDC - 7 MUSB0859 Marker 41 (cM) Automated name-based View Maps
UCcg10539_516 Marker 114.2 Cotton - HDC - 7 UCcg10539_516 Marker 39.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg10539_516 Marker Cotton 52,998,608 - 52,998,710 (bp) Automated name-based View Maps
TMB2955 Marker 119.82 Cotton - HDC - 7 TMB2955 Marker 33.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB2955 Marker Cotton 53,271,541 - 53,272,231 (bp) Automated name-based View Maps
DPL0119 Marker 128.91 Cotton - HDC - 7 DPL0119 Marker 24.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 DPL0119 Marker Cotton 8,587,963 - 8,588,758 (bp) Automated name-based View Maps
DOW007 Marker 0 Cotton - HDC - 7 DOW007 Marker 160.3 (cM) Automated name-based View Maps
DPL0364 Marker 5.46 Cotton - T3 - 16 DPL0364 Marker 1.25 (cM) Automated name-based View Maps
Cotton - HDC - 16 DPL0364 Marker 122.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 DPL0364 Marker 154.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0364 Marker Cotton 559,977 - 560,599 (bp) Automated name-based View Maps
MUSS013 Marker 6.55 Cotton - HDC - 7 MUSS013 Marker 153.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 MUSS013 Marker Cotton 441,129 - 441,551 (bp) Automated name-based View Maps
UCcg10428_166 Marker 6.93 Cotton - Graimondii_physical - Gr_Chr01 UCcg10428_166 Marker Cotton 832,625 - 832,727 (bp) Automated name-based View Maps
Cotton - HDC - 7 UCcg10428_166 Marker 153.4 (cM) Automated name-based View Maps
UCcg11240_816 Marker 9.53 Cotton - HDC - 7 UCcg11240_816 Marker 150.8 (cM) Automated name-based View Maps
MUSS011 Marker 15.48 Cotton - HDC - 7 MUSS011 Marker 144.8 (cM) Automated name-based View Maps
CIR238 Marker 21.02 Cotton - HDC - 7 CIR238 Marker 139.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 CIR238 Marker Cotton 3,440,655 - 3,441,218 (bp) Automated name-based View Maps
UCcg10503_331 Marker 21.73 Cotton - Graimondii_physical - Gr_Chr01 UCcg10503_331 Marker Cotton 2,404,401 - 2,404,503 (bp) Automated name-based View Maps
Cotton - HDC - 7 UCcg10503_331 Marker 138.6 (cM) Automated name-based View Maps
CIR320 Marker 22.24 Cotton - HDC - 7 CIR320 Marker 138.1 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR320 Marker 113 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR320 Marker 212 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 CIR320 Marker 74.48 (cM) Automated name-based View Maps
MUSB1181 Marker 27.97 Cotton - T3 - 16 MUSB1181 Marker 50.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 MUSB1181 Marker 131.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 MUSB1181 Marker Cotton 12,357,477 - 12,358,278 (bp) Automated name-based View Maps
Cotton - HDC - 16 MUSB1181 Marker 57.9 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB1181 Marker 73.06 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB1181 Marker 78.6 (cM) Automated name-based View Maps
MGHES58 Marker 32.2 Cotton - HDC - 16 CLU697 Marker 98.7 (cM) Automated name-based View Maps
Cotton - T3 - 16 MGHES58 Marker 26.05 (cM) Automated name-based View Maps
Cotton - E3 - 7 MGHES58 Marker 16.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU697 Marker 126.2 (cM) Automated name-based View Maps
DPL0186 Marker 33.48 Cotton - E3 - 7 DPL0186 Marker 15.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0186 Marker Cotton 4,593,514 - 4,594,201 (bp) Automated name-based View Maps
Cotton - HDC - 7 DPL0186 Marker 124.6 (cM) Automated name-based View Maps
NAU2078 Marker 37.55 Cotton - HDC - 7 CLU1553 Marker 119.9 (cM) Automated name-based View Maps
BNL1531 Marker 43.29 Cotton - T3 - 16 BNL1531 Marker 37.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1531 Marker 90.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL1531 Marker Cotton 7,093,402 - 7,093,765 (bp) Automated name-based View Maps
Cotton - HDC - 7 BNL1531 Marker 112.9 (cM) Automated name-based View Maps
DPL0607 Marker 44.07 Cotton - HDC - 7 DPL0607 Marker 112 (cM) Automated name-based View Maps
BNL3793 Marker 44.24 Cotton - TH - 7 BNL3793 Marker 39 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3793 Marker 37.07 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL3793 Marker 65.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3793 Marker Cotton 6,876,491 - 6,877,038 (bp) Automated name-based View Maps
Cotton - HDC - 7 BNL3793 Marker 111.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3793 Marker 90.8 (cM) Automated name-based View Maps
DPL0136 Marker 44.27 Cotton - HDC - 7 DPL0136 Marker 111.7 (cM) Automated name-based View Maps
Cotton - E3 - 7 DPL0136 Marker 26.7 (cM) Automated name-based View Maps
CIR412 Marker 44.45 Cotton - HDC - 7 CIR412 Marker 111.6 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR412 Marker 85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 CIR412 Marker 50.43 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR412 Marker Cotton 7,162,415 - 7,162,746 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR412 Marker 181.7 (cM) Automated name-based View Maps
NAU1048 Marker 46.14 Cotton - CH - 7 NAU1048 Marker 149.9 (cM) Automated name-based View Maps
Cotton - CH - 7 NAU1048 Marker 146.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU3427 Marker 109.5 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU1048 Marker 42 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU3427 Marker 108.8 (cM) Automated name-based View Maps
UCcg10436_1035 Marker 50.86 Cotton - HDC - 7 UCcg10436_1035 Marker 103.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 UCcg10436_1035 Marker Cotton 9,130,909 - 9,131,011 (bp) Automated name-based View Maps
NAU2002 Marker 53.71 Cotton - HDC - 16 CLU1166 Marker 83.2 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU2002 Marker 49.2 (cM) Automated name-based View Maps
Cotton - T3 - 16 NAU2002 Marker 46.28 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU1166 Marker 99.9 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU1166 Marker 65.4 (cM) Automated name-based View Maps