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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cocoa-SSR_SNP_consensus_map
(Reference Set)
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Maps LG9
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Feature Types:
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Correspondence		 Always Display
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Features:		 No Yes
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 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - SSR_SNP_consensus_map [ View Map Set Info ]
Map Name: LG9
Map Start: 0 cM
Map Stop: 100.9 cM
Features by Type:
182 Marker
182 Total

Map Features

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Items 51 to 75 of 182.       Previous | of 8 | Next
Cocoa - SSR_SNP_consensus_map - LG9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TcSNP235 Marker 10 Cocoa - Physical map - Tc09 TcSNP235 Marker 2,093,517 - 2,095,558 (bp) Automated name-based View Maps
mTcCIR58 Marker 59.4 Cocoa - Physical map - Tc09 mTcCIR58 Marker 21,588,642 - 21,589,168 (bp) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR58 Marker 60.1 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR58 Marker 60.1 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR58 Marker 60.1 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR58 Marker 36.3 (cM) Automated name-based View Maps
mTcCIR178 Marker 48 Cocoa - consensus_disease_res - LG9 mTcCIR178 Marker 50 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR178 Marker 47.9 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR178 Marker 50 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR178 Marker 50 (cM) Automated name-based View Maps
TcSNP346 Marker 28.4 Cocoa - Physical map - Tc09 TcSNP346 Marker 6,081,960 - 6,082,639 (bp) Automated name-based View Maps
TcSNP599 Marker 16.7 Cocoa - Physical map - Tc09 TcSNP599 Marker 3,240,331 - 3,241,046 (bp) Automated name-based View Maps
TcSNP159 Marker 75.9 No other positions
TcSNP984 Marker 66.5 Cocoa - Physical map - Tc09 TcSNP984 Marker 23,619,953 - 23,620,681 (bp) Automated name-based View Maps
TcSNP874 Marker 5.2 Cocoa - Physical map - Tc09 TcSNP874 Marker 1,209,634 - 1,211,425 (bp) Automated name-based View Maps
mTcCIR576 Marker 49.2 Cocoa - Physical map - Tc09 mTcCIR576 Marker 17,898,877 - 17,900,897 (bp) Automated name-based View Maps
TcSNP427 Marker 82 Cocoa - Physical map - Tc09 TcSNP427 Marker 27,087,617 - 27,089,849 (bp) Automated name-based View Maps
mTcCIR157 Marker 38.7 Cocoa - consensus_disease_res - LG9 mTcCIR157 Marker 40.1 (cM) Automated name-based View Maps
Cocoa - Physical map - Tc09 mTcCIR157 Marker 9,272,888 - 9,273,371 (bp) Automated name-based View Maps
Cocoa - TSH516 - LG9 mTcCIR157 Marker 58.2 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR157 Marker 40.1 (cM) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR157 Marker 40.1 (cM) Automated name-based View Maps
mTcCIR308 Marker 9.4 Cocoa - Physical map - Tc09 mTcCIR308 Marker 1,700,650 - 1,703,824 (bp) Automated name-based View Maps
TcSNP1414 Marker 58.4 Cocoa - Physical map - Tc09 TcSNP1414 Marker 21,422,529 - 21,424,570 (bp) Automated name-based View Maps
mTcCIR125 Marker 47.7 Cocoa - Physical map - Tc09 mTcCIR125 Marker 14,052,020 - 14,052,124 (bp) Automated name-based View Maps
Cocoa - test - LG9 mTcCIR125 Marker 49.4 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG9 mTcCIR125 Marker 49.4 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG9 mTcCIR125 Marker 49.4 (cM) Automated name-based View Maps
mTcCIR319 Marker 100.9 Cocoa - Physical map - Tc09 mTcCIR319 Marker 28,276,525 - 28,278,272 (bp) Automated name-based View Maps
mTcCIR317 Marker 75 Cocoa - Physical map - Tc09 mTcCIR317 Marker 26,019,569 - 26,020,870 (bp) Automated name-based View Maps
TcSNP806 Marker 25 Cocoa - Physical map - Tc09 TcSNP806 Marker 4,916,477 - 4,917,352 (bp) Automated name-based View Maps
TcSNP697 Marker 65.1 No other positions
TcSNP989 Marker 15.6 Cocoa - Physical map - Tc09 TcSNP989 Marker 3,081,281 - 3,083,577 (bp) Automated name-based View Maps
TcSNP585 Marker 4.8 Cocoa - Physical map - Tc09 TcSNP585 Marker 1,214,578 - 1,215,235 (bp) Automated name-based View Maps
mTcCIR520 Marker 49 Cocoa - Physical map - Tc09 mTcCIR520 Marker 16,992,686 - 16,994,704 (bp) Automated name-based View Maps
TcSNP374 Marker 81.5 Cocoa - Physical map - Tc09 TcSNP374 Marker 26,627,170 - 26,629,235 (bp) Automated name-based View Maps
TcSNP1064 Marker 37.5 Cocoa - Physical map - Tc09 TcSNP1064 Marker 1,145,869 - 1,148,597 (bp) Automated name-based View Maps
TcSNP728 Marker 8.7 Cocoa - Physical map - Tc09 TcSNP728 Marker 1,794,067 - 1,794,798 (bp) Automated name-based View Maps
TcSNP632 Marker 58.2 Cocoa - Physical map - Tc09 TcSNP632 Marker 21,422,235 - 21,422,603 (bp) Automated name-based View Maps