CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 7
Map Start: 0 bp
Map Stop: 29,696,629 bp
Features by Type:
252 Marker Oryza
177 QTL
429 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 429.       Previous | of 18 | Next
Rice - Synthetic_map1 - 7
(Click headers to resort)
Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
G1068 Marker Oryza 9,104,518 - 9,104,775 No other positions
RZ387 Marker Oryza 2,082,182 - 2,082,366 No other positions
R1440 Marker Oryza 16,873,350 - 16,874,331 No other positions
C1340 Marker Oryza 27,040,411 - 27,040,818 No other positions
S1723 Marker Oryza 17,687,140 - 17,687,915 No other positions
R742 Marker Oryza 14,317,700 - 14,318,117 No other positions
Y1055L Marker Oryza 9,993,966 - 9,994,167 No other positions
RM10 Marker Oryza 22,188,017 - 22,188,181 No other positions
E3029S Marker Oryza 29,514,763 - 29,515,215 No other positions
RM473C Marker Oryza 25,457,233 - 25,457,329 No other positions
MX2 Marker Oryza 25,652,511 - 25,652,668 No other positions
S11177 Marker Oryza 19,276,150 - 19,276,701 No other positions
R2658S Marker Oryza 26,603,628 - 26,603,963 No other positions
C50171S Marker Oryza 24,623,154 - 24,623,613 No other positions
R972 Marker Oryza 21,224,105 - 21,224,660 No other positions
CDO385 Marker Oryza 17,820,836 - 17,820,931 No other positions
RM320 Marker Oryza 18,693,223 - 18,693,635 No other positions
G2009 Marker Oryza 7,207,813 - 7,207,977 No other positions
RZ471 Marker Oryza 18,841,289 - 18,841,456 No other positions
R1488 Marker Oryza 5,258,283 - 5,258,767 No other positions
C145 Marker Oryza 13,436,380 - 13,436,707 No other positions
S20268 Marker Oryza 2,198,556 - 2,200,194 No other positions
RM118 Marker Oryza 26,636,604 - 26,636,764 No other positions
E3307S Marker Oryza 16,306,113 - 16,306,425 No other positions
RM481 Marker Oryza 2,875,166 - 2,875,334 No other positions