CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A02
Map Start: 0 cM
Map Stop: 177.6 cM
Features by Type:
102 Marker
16 QTL
118 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 118.       Previous | of 5 | Next
Cotton - PK - A02
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig22E12 Marker 62.7 Cotton - Graimondii_physical - Gr_Chr04 Unig22E12 Marker Cotton 51,217,334 - 51,217,979 (bp) Automated name-based View Maps
Cotton - HDC - 8 Unig22E12 Marker 72.2 (cM) Automated name-based View Maps
Unig25B12 Marker 66.6 Cotton - HDC - 8 Unig25B12 Marker 82.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig25B12 Marker Cotton 48,690,099 - 48,690,760 (bp) Automated name-based View Maps
Unig26G07 Marker 160.6 Cotton - HDC - 8 Unig26G07 Marker 140.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig26G07 Marker Cotton 1,900,769 - 1,901,434 (bp) Automated name-based View Maps
Unig27G11 Marker 69.3 Cotton - Graimondii_physical - Gr_Chr02 Unig27G11 Marker Cotton 14,489,436 - 14,490,079 (bp) Automated name-based View Maps
Cotton - HDC - 8 Unig27G11 Marker 90.2 (cM) Automated name-based View Maps
A1108 Marker 63.9 Cotton - Graimondii_physical - Gr_Chr04 A1108 Marker Cotton 50,438,707 - 50,439,764 (bp) Automated name-based View Maps
Cotton - HDC - 8 A1108 Marker 75.5 (cM) Automated name-based View Maps
A1345 Marker 91.9 Cotton - Guazuncho2xVH8-RIL - c13 A1345 Marker 2.97 (cM) Automated name-based View Maps
Cotton - PK - A03 A1345 Marker 159.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 A1345 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU3 Marker 103.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU3 Marker 51 (cM) Automated name-based View Maps
A1412 Marker 60.3 Cotton - Graimondii_physical - Gr_Chr04 A1412 Marker Cotton 54,414,571 - 54,415,971 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 A1412 Marker 79.8 (cM) Automated name-based View Maps
Cotton - GVc - 8 A1412 Marker 60.2 (cM) Automated name-based View Maps
Cotton - HDC - 8 A1412 Marker 65.2 (cM) Automated name-based View Maps
A1658 Marker 142 Cotton - HDC - 8 A1658 Marker 134.1 (cM) Automated name-based View Maps
Cotton - PK - D03 A1658 Marker 146.4 (cM) Automated name-based View Maps
Cotton - GVc - 8 A1658 Marker 158.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 A1658 Marker 214.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 A1658 Marker Cotton 3,108,042 - 3,108,248 (bp) Automated name-based View Maps
Cotton - HDC - 24 A1658 Marker 141.5 (cM) Automated name-based View Maps
A1691 Marker 66.6 Cotton - HDC - 8 A1691 Marker 82.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 A1691 Marker 39.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 A1691 Marker 275.5 (cM) Automated name-based View Maps
Cotton - PK - c1 A1691 Marker 72.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 A1691 Marker 103.4 (cM) Automated name-based View Maps
Cotton - HDC - 1 A1691 Marker 58.1 (cM) Automated name-based View Maps
A1706 Marker 29.8 Cotton - HDC - 8 A1706 Marker 30.4 (cM) Automated name-based View Maps
A1783 Marker 6.7 Cotton - PK - D03 A1783 Marker 4.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 A1783 Marker 13.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 A1783 Marker 19.8 (cM) Automated name-based View Maps
BNL3255 Marker 60.3 Cotton - Guazuncho2xVH8-BC1 - A02 BNL3255 Marker 170.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3255 Marker 79.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3255 Marker 103.5 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3255 Marker 119.2 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3255 Marker 65.6 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3255 Marker 52.8 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3255 Marker 83.2 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL3255 Marker 55.7 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3255 Marker 60.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL3255 Marker 36.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL3255 Marker Cotton 30,851,515 - 30,852,103 (bp) Automated name-based View Maps
Cotton - T3 - 8 BNL3255 Marker 84.19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL3255 Marker 113.9 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL3255 Marker 77.6 (cM) Automated name-based View Maps
BNL3556 Marker 55.1 Cotton - Guazuncho2xVH8-BC1 - A02 BNL3556 Marker 76.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3556 Marker Cotton 55,535,617 - 55,536,197 (bp) Automated name-based View Maps
Cotton - GVc - 8 BNL3556 Marker 55.2 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3556 Marker 59.4 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3556 Marker 92.25 (cM) Automated name-based View Maps
BNL3792 Marker 92.8 Cotton - TH - 8 BNL3792 Marker 87.8 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL3792 Marker 38.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL3792 Marker 52.11 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3792 Marker 56 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3792 Marker 170.6 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3792 Marker 122.6 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3792 Marker 119.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU44 Marker 103.8 (cM) Automated name-based View Maps
Coau1O15 Marker 63.3 Cotton - PK - c2 Coau1O15 Marker 96.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau1O15 Marker 73.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 Coau1O15 Marker 55.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Coau1O15 Marker Cotton 43,232,547 - 43,233,094 (bp) Automated name-based View Maps
Cotton - HDC - 8 Coau1O15 Marker 87.8 (cM) Automated name-based View Maps
Coau2A22 Marker 48.9 Cotton - Graimondii_physical - Gr_Chr08 Coau2A22 Marker Cotton 53,620,653 - 53,621,538 (bp) Automated name-based View Maps
Cotton - HDC - 8 Coau2A22 Marker 49.9 (cM) Automated name-based View Maps
Cotton - PK - A01 Coau2A22 Marker 100.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 Coau2A22 Marker 58.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau2A22 Marker 128.4 (cM) Automated name-based View Maps
coau2I12 Marker 5.2 Cotton - HDC - 8 Coau2I12 Marker 12.6 (cM) Automated name-based View Maps
G1018 Marker 92.8 Cotton - HDC - 8 G1018 Marker 103.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 G1018 Marker Cotton 36,039,343 - 36,039,637 (bp) Automated name-based View Maps
G1101 Marker 156.1 Cotton - Graimondii_physical - Gr_Chr04 G1101 Marker Cotton 2,369,207 - 2,370,245 (bp) Automated name-based View Maps
Cotton - HDC - 8 G1101 Marker 136.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 G1101 Marker 216.9 (cM) Automated name-based View Maps
Cotton - GVc - 8 G1101 Marker 161.8 (cM) Automated name-based View Maps
G1276 Marker 177.6 Cotton - Guazuncho2xVH8-BC1 - A02 G1276 Marker 235.2 (cM) Automated name-based View Maps
Cotton - PK - D03 G1276 Marker 180.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 G1276 Marker Cotton 126,439 - 127,997 (bp) Automated name-based View Maps
Cotton - GVc - 24 G1276 Marker 124 (cM) Automated name-based View Maps
Cotton - HDC - 8 G1276 Marker 156.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 G1276 Marker 155.3 (cM) Automated name-based View Maps
Cotton - GVc - 8 G1276 Marker 181 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 G1276 Marker 171.3 (cM) Automated name-based View Maps
Gafb16D09 Marker 46.7 Cotton - HDC - 8 Gafb16D09 Marker 46.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gafb16D09 Marker Cotton 57,157,344 - 57,157,964 (bp) Automated name-based View Maps
Gate1AE07 Marker 46.7 Cotton - HDC - 8 Gate1AE07 Marker 46.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gate1AE07 Marker 95.2 (cM) Automated name-based View Maps
Cotton - PK - A01 Gate1AE07 Marker 56.9 (cM) Automated name-based View Maps
Gate1AF08 Marker 16.2 Cotton - Graimondii_physical - Gr_Chr05 Gate1AF08 Marker Cotton 27,924,233 - 27,924,701 (bp) Automated name-based View Maps
Cotton - HDC - 8 Gate1AF08 Marker 20.7 (cM) Automated name-based View Maps
Gate1BF03 Marker 139.1 Cotton - HDC - 10 Gate1BF03 Marker 125.3 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gate1BF03 Marker 133.1 (cM) Automated name-based View Maps
Cotton - PK - c10 Gate1BF03 Marker 55 (cM) Automated name-based View Maps
Gate1CE09 Marker 20.2 Cotton - HDC - 8 Gate1CE09 Marker 23.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gate1CE09 Marker Cotton 24,607,795 - 24,608,499 (bp) Automated name-based View Maps