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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 10
Map Start: 0 bp
Map Stop: 23.21 bp
Features by Type:
110 Marker
21 QTL
131 Total

Map Features

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Items 26 to 50 of 131.       Previous | of 6 | Next
Rice - Synthethic_map - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B113B Marker 21.859 - 21.861 Maize - Physical_map_IBM2 - 1 B113B Marker 91.26 (bp) Automated name-based, Automated name-based View Maps
RG752 Marker 19.823 No other positions
B089B Marker 11.936 - 11.943 Maize - Physical_map_IBM2 - 1 B089B Marker 138.65 (bp) Automated name-based, Automated name-based View Maps
B105E Marker 19.757 - 19.768 Maize - Physical_map_IBM2 - 5 B105E Marker 22.58 (bp) Automated name-based, Automated name-based View Maps
R2174 Marker 5.504 No other positions
B097E Marker 16.236 - 16.238 Maize - Physical_map_IBM2 - 5 B097E Marker 31.56 - 31.57 (bp) Automated name-based, Automated name-based View Maps
B114B Marker 22.025 - 22.035 Maize - Physical_map_IBM2 - 9 B114B Marker 115.91 - 115.92 (bp) Automated name-based, Automated name-based View Maps
OsORC3 Marker 13.6 - 13.606 No other positions
RM228 Marker 22.243 No other positions
B090B Marker 12.868 - 12.87 Maize - Physical_map_IBM2 - 5 B090B Marker 37.46 (bp) Automated name-based, Automated name-based View Maps
B106E Marker 20.082 - 20.084 Maize - Physical_map_IBM2 - 5 B106E Marker 21.39 (bp) Automated name-based, Automated name-based View Maps
RM3152 Marker 10.21 No other positions
B099B Marker 17.048 - 17.053 Maize - Physical_map_IBM2 - 5 B099B Marker 31.02 - 31.03 (bp) Automated name-based, Automated name-based View Maps
B115B Marker 22.153 - 22.154 Maize - Physical_map_IBM2 - 1 B115B Marker 93.08 (bp) Automated name-based, Automated name-based View Maps
OsPT8 Marker 16.035 - 16.038 No other positions
ID12_14 Marker 23.053 No other positions
B091E Marker 12.968 - 12.974 Maize - Physical_map_IBM2 - 1 B091E Marker 141.75 (bp) Automated name-based, Automated name-based View Maps
B107B Marker 20.136 - 20.14 Maize - Physical_map_IBM2 - 1 B107B Marker 79.72 (bp) Automated name-based, Automated name-based View Maps
RZ892A Marker 12.903 No other positions
B100B Marker 17.076 - 17.078 Maize - Physical_map_IBM2 - 1 B100B Marker 234.48 (bp) Automated name-based, Automated name-based View Maps
B116B Marker 22.63 - 22.631 Maize - Physical_map_IBM2 - 1 B116B Marker 100.83 (bp) Automated name-based, Automated name-based View Maps
"OsNIP3;1" Marker 19.778 - 19.785 No other positions
RG241A Marker 15.844 - 15.845 No other positions
B092E Marker 13.933 - 13.935 Maize - Physical_map_IBM2 - 1 B092E Marker 242.49 (bp) Automated name-based, Automated name-based View Maps
B108E Marker 20.346 - 20.347 Maize - Physical_map_IBM2 - 9 B108E Marker 156.04 (bp) Automated name-based, Automated name-based View Maps