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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 12
Map Start: 0 bp
Map Stop: 27.53 bp
Features by Type:
130 Marker
25 QTL
155 Total

Map Features

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Items 26 to 50 of 154.       Previous | of 7 | Next
Rice - Synthethic_map - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
G124 Marker 4.103 No other positions
B170E Marker 0.877 - 0.878 Maize - Physical_map_IBM2 - 2 B170E Marker 152.1 (bp) Automated name-based, Automated name-based View Maps
B187B Marker 19.488 - 19.493 Maize - Physical_map_IBM2 - 6 B187B Marker 22.92 (bp) Automated name-based, Automated name-based View Maps
B197E Marker 23.326 - 23.327 Maize - Physical_map_IBM2 - 1 B197E Marker 150.72 (bp) Automated name-based, Automated name-based View Maps
B212E Marker 27.272 - 27.274 Maize - Physical_map_IBM2 - 1 B212E Marker 179.62 (bp) Automated name-based, Automated name-based View Maps
RG463 Marker 24.586 No other positions
B178E Marker 4.516 - 4.517 Maize - Physical_map_IBM2 - 10 B178E Marker 16.52 - 16.53 (bp) Automated name-based, Automated name-based View Maps
B206B Marker 25.509 - 25.517 Maize - Physical_map_IBM2 - 1 B206B Marker 170.83 - 170.87 (bp) Automated name-based, Automated name-based View Maps
RZ397 Marker 5.759 No other positions
B172B Marker 0.975 - 0.977 Maize - Physical_map_IBM2 - 10 B172B Marker 3.02 (bp) Automated name-based, Automated name-based View Maps
B187E Marker 19.922 - 19.928 Maize - Physical_map_IBM2 - 6 B187E Marker 21 - 21.01 (bp) Automated name-based, Automated name-based View Maps
B198E Marker 23.926 - 23.929 Maize - Physical_map_IBM2 - 1 B198E Marker 158.65 (bp) Automated name-based, Automated name-based View Maps
"OsAMT5;1" Marker 0.266 - 0.267 No other positions
B214E Marker 27.496 - 27.508 Maize - Physical_map_IBM2 - 1 B214E Marker 180.96 - 180.98 (bp) Automated name-based, Automated name-based View Maps
RM235 Marker 26.108 No other positions
B180B Marker 5.385 - 5.387 Maize - Physical_map_IBM2 - 10 B180B Marker 30.15 (bp) Automated name-based, Automated name-based View Maps
B206E Marker 25.738 - 25.741 Maize - Physical_map_IBM2 - 1 B206E Marker 172.21 (bp) Automated name-based, Automated name-based View Maps
RG869 Marker 7.729 No other positions
B172E Marker 1.501 - 1.505 Maize - Physical_map_IBM2 - 10 B172E Marker 2.04 (bp) Automated name-based, Automated name-based View Maps
B188E Marker 20.029 - 20.032 Maize - Physical_map_IBM2 - 10 B188E Marker 27.55 (bp) Automated name-based, Automated name-based View Maps
B199B Marker 24.038 - 24.039 Maize - Physical_map_IBM2 - 1 B199B Marker 160.82 - 160.83 (bp) Automated name-based, Automated name-based View Maps
OsPT26 Marker 4.044 No other positions
RG181 Marker 27.488 No other positions
B181B Marker 6.678 - 6.68 Maize - Physical_map_IBM2 - 10 B181B Marker 32.83 - 32.84 (bp) Automated name-based, Automated name-based View Maps
B208B Marker 25.752 - 25.758 Maize - Physical_map_IBM2 - 1 B208B Marker 172.83 - 172.84 (bp) Automated name-based, Automated name-based View Maps