CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c23
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c23
Map Start: 0 cM
Map Stop: 172.6 cM
Features by Type:
95 Marker
9 QTL
104 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 104.       of 5 | Next
Cotton - PK - c23
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate1AA09 Marker 145.6 Cotton - Graimondii_physical - Gr_Chr06 Gate1AA09 Marker Cotton 47,603,596 - 47,604,058 (bp) Automated name-based View Maps
Cotton - HDC - 23 Gate1AA09 Marker 144.1 (cM) Automated name-based View Maps
Gate1AE12 Marker 53.9 Cotton - Graimondii_physical - Gr_Chr07 Gate1AE12 Marker Cotton 5,359,470 - 5,359,938 (bp) Automated name-based View Maps
Cotton - HDC - 23 Gate1AE12 Marker 53.4 (cM) Automated name-based View Maps
Gate1CC04 Marker 1.1 Cotton - HDC - 5 Gate1CC04 Marker 86 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate1CC04 Marker 55.4 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate1CC04 Marker 58 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate1CC04 Marker Cotton 8,970,723 - 8,971,553 (bp) Automated name-based View Maps
Cotton - HDC - 5 Gate1CC04 Marker 85.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate1CC04 Marker 1.1 (cM) Automated name-based View Maps
Gate2BB08 Marker 100.1 Cotton - HDC - 9 Gate2BB08 Marker 82.9 (cM) Automated name-based View Maps
Cotton - PK - c22 Gate2BB08 Marker 47.6 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gate2BB08 Marker 46.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BB08 Marker 101.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate2BB08 Marker 45.6 (cM) Automated name-based View Maps
Cotton - PK - c9 Gate2BB08 Marker 74.4 (cM) Automated name-based View Maps
Cotton - PK - c5 Gate2BB08 Marker 159.5 (cM) Automated name-based View Maps
Gate2BE06 Marker 120.4 Cotton - Graimondii_physical - Gr_Chr12 Gate2BE06 Marker Cotton 26,242,759 - 26,243,442 (bp) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 123.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 119.4 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate2BE06 Marker 89.4 (cM) Automated name-based View Maps
Cotton - PK - c9 Gate2BE06 Marker 90 (cM) Automated name-based View Maps
Gate3BE06 Marker 24.8 Cotton - HDC - 23 Gate3BE06 Marker 24.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Gate3BE06 Marker Cotton 277,157 - 277,900 (bp) Automated name-based View Maps
Gate3BF10 Marker 169.1 Cotton - PK - c9 Gate3BF10 Marker 148.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate3BF10 Marker 167.4 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate3BF10 Marker 129.4 (cM) Automated name-based View Maps
Cotton - PK - D03 Gate3BF10 Marker 15.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 Gate3BF10 Marker 28.3 (cM) Automated name-based View Maps
Gate3CB01 Marker 24.8 Cotton - HDC - 23 Gate3CB01 Marker 24.6 (cM) Automated name-based View Maps
Gate3CG11 Marker 79.1 Cotton - HDC - 23 Gate3CG11 Marker 76.8 (cM) Automated name-based View Maps
Cotton - PK - c9 Gate3CG11 Marker 40.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate3CG11 Marker 44.5 (cM) Automated name-based View Maps
Gate4AA11 Marker 119.1 Cotton - HDC - 23 Gate4AA11 Marker 118.2 (cM) Automated name-based View Maps
Gate4AH01 Marker 27.8 Cotton - HDC - 23 Gate4AH01 Marker 27.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Gate4AH01 Marker Cotton 1,311,606 - 1,312,458 (bp) Automated name-based View Maps
Gate4BD06 Marker 101.8 Cotton - HDC - 23 Gate4BD06 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Gate4BD06 Marker Cotton 37,013,904 - 37,014,703 (bp) Automated name-based View Maps
Gate4CA09 Marker 106.7 Cotton - PK - c4 Gate4CA09 Marker 98.3 (cM) Automated name-based View Maps
Cotton - PK - c22 Gate4CA09 Marker 43.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Gate4CA09 Marker Cotton 59,017,433 - 59,018,146 (bp) Automated name-based View Maps
Cotton - HDC - 4 Gate4CA09 Marker 62 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate4CA09 Marker 110.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4CA09 Marker 50.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate4CA09 Marker 107.3 (cM) Automated name-based View Maps
Gate4DB01 Marker 145.6 Cotton - HDC - 23 Gate4DB01 Marker 144.1 (cM) Automated name-based View Maps
M16_125 Marker 111.6 Cotton - GVc - 23 M16_125 Marker 88.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 M16_125 Marker Cotton 45,432,857 - 45,434,030 (bp) Automated name-based View Maps
Cotton - HDC - 23 M16_125 Marker 112.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 M16_125 Marker 163.3 (cM) Automated name-based View Maps
Cotton - PK - c4 M16_125 Marker 108.9 (cM) Automated name-based View Maps
P12_12 Marker 71.8 Cotton - HDC - 9 P12_12 Marker 23.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 P12_12 Marker 72.4 (cM) Automated name-based View Maps
Cotton - PK - c9 P12_12 Marker 33.9 (cM) Automated name-based View Maps
PAR01B05 Marker 40.2 Cotton - HDC - 23 pAR01B05 Marker 39.8 (cM) Automated name-based View Maps
pAR083 Marker 82.7 Cotton - Graimondii_physical - Gr_Chr06 pAR083 Marker Cotton 33,826,740 - 33,827,074 (bp) Automated name-based View Maps
Cotton - PK - c9 pAR083 Marker 42.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 pAR083 Marker 78.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 pAR083 Marker 49.6 (cM) Automated name-based View Maps
pAR10G06 Marker 139.4 Cotton - HDC - 23 pAR10G06 Marker 138 (cM) Automated name-based View Maps
pAR209 Marker 132.4 Cotton - HDC - 23 pAR209 Marker 131.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR209 Marker Cotton 46,799,705 - 46,800,031 (bp) Automated name-based View Maps
pAR279 Marker 139.4 Cotton - Graimondii_physical - Gr_Chr06 pAR279 Marker Cotton 36,656,583 - 36,657,127 (bp) Automated name-based View Maps
Cotton - HDC - 23 pAR279 Marker 138 (cM) Automated name-based View Maps
pAR497 Marker 33.2 Cotton - HDC - 23 pAR497 Marker 43.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR497 Marker Cotton 2,424,404 - 2,425,895 (bp) Automated name-based View Maps
Cotton - HDC - 23 pAR497 Marker 32.9 (cM) Automated name-based View Maps
pAR547 Marker 62.8 Cotton - Guazuncho2xVH8-BC1 - c23 pAR547 Marker 91.6 (cM) Automated name-based View Maps
Cotton - HDC - 23 pAR547 Marker 62.2 (cM) Automated name-based View Maps
Cotton - GVc - 23 pAR547 Marker 35.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR547 Marker Cotton 10,077,075 - 10,077,639 (bp) Automated name-based View Maps
pGH558 Marker 169.1 Cotton - Graimondii_physical - Gr_Chr06 pGH558 Marker Cotton 51,025,188 - 51,025,916 (bp) Automated name-based View Maps
Cotton - HDC - 23 pGH558 Marker 167.4 (cM) Automated name-based View Maps
pGH783 Marker 111.9 Cotton - PK - c9 pGH783 Marker 79.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 pGH783 Marker 85.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pGH783 Marker Cotton 42,603,421 - 42,604,202 (bp) Automated name-based View Maps
Cotton - HDC - 23 pGH783 Marker 111.6 (cM) Automated name-based View Maps