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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 3
Map Start: 0 bp
Map Stop: 36.41 bp
Features by Type:
232 Marker
64 QTL
296 Total

Map Features

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Items 1 to 25 of 295.       of 12 | Next
Rice - Synthethic_map - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
CRL4 Marker 6.208 - 26.202 No other positions
B318B Marker 17.093 - 17.095 Maize - Physical_map_IBM2 - 1 B318B Marker 72.71 (bp) Automated name-based, Automated name-based View Maps
R2170 Marker 14.291 No other positions
B334E Marker 24.638 - 24.641 Maize - Physical_map_IBM2 - 5 B334E Marker 17.99 - 18 (bp) Automated name-based, Automated name-based View Maps
RZ393 Marker 35.827 No other positions
B350E Marker 33.738 - 33.739 Maize - Physical_map_IBM2 - 1 B350E Marker 290.39 (bp) Automated name-based, Automated name-based View Maps
B302E Marker 8.897 - 8.902 Maize - Physical_map_IBM2 - 9 B302E Marker 140.37 - 140.38 (bp) Automated name-based, Automated name-based View Maps
B358E Marker 36.395 - 36.401 Maize - Physical_map_IBM2 - 1 B358E Marker 300.54 - 300.55 (bp) Automated name-based, Automated name-based View Maps
B310E Marker 15.33 - 15.334 Maize - Physical_map_IBM2 - 1 B310E Marker 66.02 (bp) Automated name-based, Automated name-based View Maps
RG409A Marker 3.496 No other positions
B327B Marker 21.378 - 21.382 Maize - Physical_map_IBM2 - 5 B327B Marker 19.69 (bp) Automated name-based, Automated name-based View Maps
CDO337 Marker 28.232 No other positions
B343B Marker 28.566 - 28.567 Maize - Physical_map_IBM2 - 1 B343B Marker 266.98 (bp) Automated name-based, Automated name-based View Maps
B295B Marker 3.654 - 3.657 Maize - Physical_map_IBM2 - 9 B295B Marker 151.75 (bp) Automated name-based, Automated name-based View Maps
d14 Marker 5.422 - 5.424 No other positions
B304B Marker 11.327 - 11.328 Maize - Physical_map_IBM2 - 9 B304B Marker 134.05 (bp) Automated name-based, Automated name-based View Maps
OsIAA13 Marker 30.481 - 30.483 No other positions
B319E Marker 17.57 - 17.572 Maize - Physical_map_IBM2 - 9 B319E Marker 123.99 - 124 (bp) Automated name-based, Automated name-based View Maps
G144 Marker 15.336 No other positions
B336B Marker 24.959 - 24.961 Maize - Physical_map_IBM2 - 7 B336B Marker 5.98 (bp) Automated name-based, Automated name-based View Maps
B287B Marker 0.019 - 0.02 Maize - Physical_map_IBM2 - 1 B287B Marker 0.51 - 0.52 (bp) Automated name-based, Automated name-based View Maps
B351E Marker 33.999 Maize - Physical_map_IBM2 - 1 B351E Marker 292.03 (bp) Automated name-based, Automated name-based View Maps
B312B Marker 15.41 - 15.419 Maize - Physical_map_IBM2 - 1 B312B Marker 67.53 - 67.54 (bp) Automated name-based, Automated name-based View Maps
RM489 Marker 4.334 No other positions
B326E Marker 21.688 - 21.693 Maize - Physical_map_IBM2 - 1 B326E Marker 246.88 (bp) Automated name-based, Automated name-based View Maps