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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Guazuncho2xVH8-BC2
(Reference Set)
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Correspondences
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Maps c18
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC2 [ View Map Set Info ]
Map Name: c18
Map Start: 0 cM
Map Stop: 100.7 cM
Features by Type:
20 Marker
20 Total

Map Features

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Items 1 to 20 of 20.
Cotton - Guazuncho2xVH8-BC2 - c18
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E8M8_140 Marker 0 Cotton - HDC - 18 E8M8_140 Marker 99.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 E8M8_140 Marker 19.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E8M8_140 Marker 21.8 (cM) Automated name-based View Maps
BNL2571 Marker 6 Cotton - Guazuncho2xVH8-RIL - c18 BNL2571b Marker 15.54 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL2571 Marker 95.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 BNL2571 Marker 31.8 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL2571 Marker 67.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL2571 Marker 99.6 (cM) Automated name-based View Maps
Cotton - CH - 13 BNL2571 Marker 45 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL2571 Marker 23.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL2571 Marker 25.7 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL2571 Marker 22 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A01 BNL2571 Marker 14.4 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL2571 Marker 34.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 BNL2571 Marker 53.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL2571 Marker Cotton 54,054,874 - 54,055,401 (bp) Automated name-based View Maps
E3M5_112 Marker 25 Cotton - GVc - 18 E3M5_112 Marker 43.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 E3M5_112 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E3M5_112 Marker 46.2 (cM) Automated name-based View Maps
E1M5_410 Marker 30.1 Cotton - HDC - 18 E1M5_410 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E1M5_410 Marker 53.2 (cM) Automated name-based View Maps
Cotton - GVc - 18 E1M5_410 Marker 47.6 (cM) Automated name-based View Maps
E3M8_400 Marker 38.6 Cotton - Guazuncho2xVH8-BC1 - c18 E3M8_400 Marker 63.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 E3M8_400 Marker 64.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 E3M8_400 Marker 56.9 (cM) Automated name-based View Maps
E7M5_185 Marker 46.5 Cotton - GVc - 18 E7M5_185 Marker 65.6 (cM) Automated name-based View Maps
Cotton - HDC - 18 E7M5_185 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E7M5_185 Marker 74.2 (cM) Automated name-based View Maps
BNL3479 Marker 50.7 Cotton - PK - A01 BNL3479 Marker 88.3 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL3479 Marker 82 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL3479 Marker 67.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL3479 Marker Cotton 37,677,610 - 37,678,015 (bp) Automated name-based View Maps
Cotton - TH - 18 BNL3479 Marker 66 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL3479 Marker 57.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3479 Marker 91.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL3479 Marker 71.1 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL3479 Marker 49.17 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL3479 Marker 75.6 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3479 Marker 50.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3479 Marker 76.8 (cM) Automated name-based View Maps
BNL3280 Marker 50.7 Cotton - Guazuncho2xVH8-RIL - c20 BNL3280b Marker 89.94 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3280 Marker 65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL3280a Marker 56.2 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL3280 Marker 47.32 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3280 Marker 77.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3280 Marker 118.9 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL3280 Marker 66.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3280 Marker 93 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3280 Marker 37.8 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL3280 Marker 83.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL3280 Marker Cotton 36,736,808 - 36,737,272 (bp) Automated name-based View Maps
Cotton - T3 - 20 BNL3280 Marker 103.42 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL3280 Marker 66.8 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL3280 Marker 56.5 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3280 Marker 107.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3280 Marker 245.3 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3280 Marker 144.9 (cM) Automated name-based View Maps
E8M8_182 Marker 54.8 No other positions
E6M8_152 Marker 60.3 Cotton - Guazuncho2xVH8-BC1 - c18 E6M8_152 Marker 100.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 E6M8_152 Marker 51.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 E6M8_152 Marker 84.1 (cM) Automated name-based View Maps
E3M1_115 Marker 63.1 No other positions
E1M8_145 Marker 67.3 No other positions
E2M7_520 Marker 67.7 Cotton - HDC - 18 E2M7_520 Marker 46.6 (cM) Automated name-based View Maps
Cotton - GVc - 18 E2M7_520 Marker 91.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E2M7_520 Marker 107.2 (cM) Automated name-based View Maps
E3M4_350 Marker 69 Cotton - HDC - 18 E3M4_350 Marker 43.8 (cM) Automated name-based View Maps
Cotton - GVc - 18 E3M4_350 Marker 96.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E3M4_350 Marker 109.7 (cM) Automated name-based View Maps
E6M5_120 Marker 70.1 Cotton - GVc - 18 E6M5_120 Marker 93.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E6M5_120 Marker 109.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 E6M5_120 Marker 45.7 (cM) Automated name-based View Maps
E7M1_123 Marker 71.6 No other positions
BNL3558 Marker 71.6 Cotton - E3 - 18 BNL3558 Marker 101.6 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL3558 Marker 40.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3558 Marker 111.1 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL3558 Marker 48.2 (cM) Automated name-based View Maps
Cotton - CH - 13 BNL3558 Marker 99.1 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL3558 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL3558 Marker 82.29 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3558 Marker 32.7 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL3558 Marker 32.87 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3558 Marker 100.2 (cM) Automated name-based View Maps
E3M6_390 Marker 71.8 Cotton - Guazuncho2xVH8-BC1 - c18 E3M6_390 Marker 112.2 (cM) Automated name-based View Maps
Cotton - HDC - 18 E3M6_390 Marker 47.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 E3M6_390 Marker 90.3 (cM) Automated name-based View Maps
BNL193 Marker 87.8 Cotton - HDC - 18 BNL0193 Marker 25.9 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL0193 Marker 10.2 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL0193 Marker 19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL193 Marker 143.3 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL0193 Marker 107.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL0193u Marker 60.74 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0193 Marker 44.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL0193 Marker 99.65 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL0193 Marker 115.2 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL0193 Marker 101.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL0193 Marker 119.9 (cM) Automated name-based View Maps
E4M2_140 Marker 100.7 Cotton - HDC - 18 E4M2_140 Marker 8.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 E4M2_140 Marker 135.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 E4M2_140 Marker 158.9 (cM) Automated name-based View Maps