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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-(Sca6xH)xC1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - (Sca6xH)xC1 [ View Map Set Info ]
Map Name: LG3
Map Start: 0 cM
Map Stop: 75.4 cM
Features by Type:
28 Marker
1 QTL
29 Total

Map Features

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Items 1 to 25 of 29.       of 2 | Next
Cocoa - (Sca6xH)xC1 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_SxHxC9/10 Marker 75.4 No other positions
AFLP_SxHxC2/6 Marker 72.6 No other positions
AFLP_SxHxC6/1 Marker 47.5 No other positions
AFLP_SxHxC8/16 Marker 28 No other positions
AFLP_SxHxC14/9 Marker 26.4 No other positions
AFLP_SxHxC8/22 Marker 20.4 No other positions
AFLP_SxHxC8/5 Marker 20.3 No other positions
AFLP_SxHxC6/13 Marker 18.7 No other positions
AFLP_SxHxC10/14 Marker 17.5 No other positions
AFLP_SxHxC6/6 Marker 16.1 No other positions
AFLP_SxHxC10/3 Marker 15.5 No other positions
AFLP_SxHxC11/3 Marker 14.3 No other positions
AFLP_SxHxC5/1 Marker 14.1 No other positions
AFLP_SxHxC6/8 Marker 13.2 No other positions
AFLP_SxHxC4/3 Marker 12.9 No other positions
mTcCIR62 Marker 12.6 Cocoa - test - LG3 mTcCIR62 Marker 16.7 (cM) Automated name-based View Maps
Cocoa - consensus_disease_res - LG3 mTcCIR62 Marker 16.7 (cM) Automated name-based View Maps
Cocoa - TSH516 - LG3 mTcCIR62 Marker 68 (cM) Automated name-based View Maps
AFLP_SxHxC13/7 Marker 11.6 No other positions
AFLP_SxHxC5/5 Marker 11.4 No other positions
AFLP_SxHxC10/15 Marker 10.4 No other positions
AFLP_SxHxC5/6 Marker 8.7 No other positions
AFLP_SxHxC12/2 Marker 8.1 No other positions
AFLP_SxHxC8/20 Marker 3.7 No other positions
AFLP_SxHxC12/13 Marker 1.7 No other positions
AFLP_SxHxC9/3 Marker 1.4 No other positions
AFLP_SxHxC8/18 Marker 0.7 No other positions