CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-CH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - CH [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 120.6 cM
Features by Type:
19 Marker
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Cotton - CH - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MGHES27 Marker 0 Cotton - HDC - 10 CLU1360 Marker 134.8 (cM) Automated name-based View Maps
Cotton - E3 - 10 MGHES27 Marker 128.8 (cM) Automated name-based View Maps
BNL0256 Marker 10.5 Cotton - HDC - 10 BNL0256 Marker 122 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL256 Marker 20.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL0256 Marker 92.4 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL0256 Marker 43.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL256 Marker 18.1 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL0256 Marker 20.3 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL0256 Marker 124.1 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL0256 Marker 57.4 (cM) Automated name-based View Maps
BNL2530 Marker 14.5 Cotton - Graimondii_physical - Gr_Chr04 BNL2530 Marker Cotton 38,295,155 - 38,295,521 (bp) Automated name-based View Maps
Cotton - TH - 10 BNL2530 Marker 53 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL2530 Marker 101.8 (cM) Automated name-based View Maps
BNL1665 Marker 25.2 Cotton - HDC - 10 BNL1665 Marker 96.4 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL1665 Marker 58.2 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL1665 Marker 112.5 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1665 Marker 74.31 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL1665 Marker Cotton 28,647,035 - 28,647,452 (bp) Automated name-based View Maps
CIR171 Marker 28.3 Cotton - HDC - 10 CIR171 Marker 96.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR171 Marker 161 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR171 Marker 60.2 (cM) Automated name-based View Maps
Cotton - E3 - 10 CIR171 Marker 111 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR171a Marker 11.47 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR171 Marker Cotton 43,500,729 - 43,501,031 (bp) Automated name-based View Maps
Cotton - GVc - 20 CIR171 Marker 96.2 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR171 Marker 78.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR171 Marker 54.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR171b Marker 57.32 (cM) Automated name-based View Maps
JESPR261 Marker 28.8 Cotton - HDC - 10 JESPR261 Marker 114.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 JESPR261 Marker Cotton 15,327,215 - 15,327,409 (bp) Automated name-based View Maps
Cotton - E3 - 20 JESPR261 Marker 101.7 (cM) Automated name-based View Maps
Cotton - T3 - 10 JESPR261 Marker 87.27 (cM) Automated name-based View Maps
Cotton - HDC - 20 JESPR261 Marker 99 (cM) Automated name-based View Maps
BNL3895 Marker 29.6 Cotton - Guazuncho2xVH8-BC1 - c10 BNL3895 Marker 77.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL3895 Marker 16.05 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3895 Marker Cotton 23,404,944 - 23,405,314 (bp) Automated name-based View Maps
Cotton - T3 - 10 BNL3895 Marker 68.86 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3895 Marker 89.5 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL3895 Marker 101.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL3895 Marker 64.5 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3895 Marker 60.9 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL3895 Marker 71.4 (cM) Automated name-based View Maps
NAU0921 Marker 36.4 Cotton - TH - 10 NAU0921 Marker 62.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU0921 Marker 81.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU0921 Marker Cotton 17,797,789 - 17,798,463 (bp) Automated name-based View Maps
BNL2705 Marker 42.4 Cotton - E3 - 10 BNL2705 Marker 85 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL2705 Marker 57.66 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL2705 Marker 76.4 (cM) Automated name-based View Maps
BNL2872 Marker 44.5 Cotton - E3 - 10 BNL2872 Marker 93.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL2872 Marker 85.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL2872 Marker Cotton 9,875,587 - 9,875,900 (bp) Automated name-based View Maps
BNL3790 Marker 52.8 Cotton - E3 - 10 BNL3790 Marker 69.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3790 Marker 69 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3790 Marker Cotton 50,292,213 - 50,292,729 (bp) Automated name-based View Maps
BNL3563 Marker 58.9 Cotton - HDC - 10 BNL3563 Marker 60 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3563 Marker Cotton 51,975,551 - 51,976,086 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3563 Marker 130 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3563 Marker 72.1 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL3563 Marker 45.48 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL3563 Marker 112.4 (cM) Automated name-based View Maps
BNL2960 Marker 61.5 Cotton - Guazuncho2xVH8-BC1 - c10 BNL2960 Marker 134 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL2960 Marker 57.1 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL2960 Marker 114 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL2960 Marker 80 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL2960 Marker 41.59 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL2960 Marker 130.9 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL2960 Marker 40.73 (cM) Automated name-based View Maps
NAU1182 Marker 63.8 Cotton - GVc - 10 NAU1182 Marker 112.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 NAU1182 Marker 43.77 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU1182 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3539 Marker 56 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU1182 Marker 36.85 (cM) Automated name-based View Maps
NAU1182 Marker 64 Cotton - Guazuncho2xVH8-RIL - c10 NAU1182 Marker 43.77 (cM) Automated name-based View Maps
Cotton - GVc - 10 NAU1182 Marker 112.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU1182 Marker 36.85 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU1182 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3539 Marker 56 (cM) Automated name-based View Maps
NAU1236 Marker 66 Cotton - TH - 10 NAU1236 Marker 78.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU938 Marker 52.4 (cM) Automated name-based View Maps
CIR166 Marker 75.7 Cotton - E3 - 10 CIR166 Marker 43.6 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR166 Marker 44.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR166 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR166 Marker Cotton 48,926,966 - 48,927,332 (bp) Automated name-based View Maps
Cotton - TH - 10 CIR166 Marker 65.8 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR166 Marker 41.6 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR166 Marker 105.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR166 Marker 180.5 (cM) Automated name-based View Maps
MUCS023 Marker 89.6 Cotton - HDC - 10 CLU220 Marker 38.7 (cM) Automated name-based View Maps
NAU1169 Marker 120.6 Cotton - Guazuncho2xVH8-BC1 - c10 NAU1169 Marker 181.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 NAU1169 Marker 67.71 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU1169 Marker 25.8 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU1169 Marker 104.8 (cM) Automated name-based View Maps
Cotton - GVc - 10 NAU1169 Marker 142.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU1169 Marker 38.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU1169 Marker Cotton 60,679,849 - 60,680,446 (bp) Automated name-based View Maps