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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-CH
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Correspondences
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Maps 16
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Feature Types:
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Correspondence		 Always Display
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Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - CH [ View Map Set Info ]
Map Name: 16
Map Start: 0 cM
Map Stop: 142.4 cM
Features by Type:
17 Marker
17 Total

Map Features

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Items 1 to 17 of 17.
Cotton - CH - 16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR169 Marker 142.4 Cotton - Guazuncho2xVH8-RIL - c7 CIR169 Marker 36.21 (cM) Automated name-based View Maps
Cotton - E3 - 7 CIR169 Marker 41.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 CIR169 Marker 95.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR169 Marker 150.1 (cM) Automated name-based View Maps
Cotton - T3 - 7 CIR169 Marker 57.28 (cM) Automated name-based View Maps
Cotton - GVc - 7 CIR169 Marker 66.9 (cM) Automated name-based View Maps
BNL3432 Marker 102.8 No other positions
MGHES75 Marker 93.4 Cotton - GVc - 16 MGHES75 Marker 83.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU2102 Marker 80.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 MGHES75 Marker 37.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU2102 Marker 97.7 (cM) Automated name-based View Maps
Cotton - E3 - 7 MGHES75 Marker 36.3 (cM) Automated name-based View Maps
MGHES36 Marker 86 Cotton - HDC - 16 CLU2559 Marker 97.6 (cM) Automated name-based View Maps
MGHES12 Marker 82.9 No other positions
BNL2634 Marker 80.4 Cotton - HDC - 16 BNL2634 Marker 87.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL2634 Marker 41.55 (cM) Automated name-based View Maps
CIR107 Marker 78.2 Cotton - GVc - 16 CIR107 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR107 Marker Cotton 8,839,579 - 8,839,829 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 CIR107 Marker 165.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 CIR107 Marker 43.12 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 CIR107 Marker 41.89 (cM) Automated name-based View Maps
Cotton - HDC - 16 CIR107 Marker 86.4 (cM) Automated name-based View Maps
Cotton - E3 - 16 CIR107 Marker 72.3 (cM) Automated name-based View Maps
JESPR102 Marker 75.7 Cotton - Guazuncho2xVH8-BC1 - c16 JESPR102 Marker 127.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU303 Marker 80.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 75.7 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR102 Marker 78 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR102 Marker 101.2 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR102 Marker 47.06 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR102 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 61.4 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR102 Marker 63.8 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR102 Marker 67.3 (cM) Automated name-based View Maps
BNL2734 Marker 69.5 Cotton - E3 - 16 BNL2734 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL2734 Marker Cotton 12,287,050 - 12,287,438 (bp) Automated name-based View Maps
Cotton - HDC - 16 BNL2734 Marker 80.4 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL2734 Marker 117.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL2734 Marker 36.4 (cM) Automated name-based View Maps
BNL3008 Marker 69 Cotton - E3 - 16 BNL3008 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3008 Marker Cotton 12,327,665 - 12,327,992 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL3008 Marker 127.5 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3008 Marker 81.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3008 Marker 79.7 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL3008 Marker 78.6 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL3008 Marker 63.2 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3008 Marker 49.75 (cM) Automated name-based View Maps
CIR100 Marker 68.5 Cotton - Guazuncho2xVH8-BC1 - c16 CIR100 Marker 147.9 (cM) Automated name-based View Maps
Cotton - T3 - 16 CIR100 Marker 51.97 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR100 Marker Cotton 12,757,196 - 12,757,404 (bp) Automated name-based View Maps
Cotton - HDC - 16 CIR100 Marker 77.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 CIR100 Marker 35.77 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR100 Marker 80.3 (cM) Automated name-based View Maps
Cotton - TH - 16 CIR100 Marker 64.3 (cM) Automated name-based View Maps
JESPR292 Marker 57.5 Cotton - TH - 16 JESPR292 Marker 36 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR292 Marker 23.01 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR292 Marker 45.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR292 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR292 Marker 181.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 JESPR292 Marker 100.9 (cM) Automated name-based View Maps
BNL2986 Marker 54.1 Cotton - Graimondii_physical - Gr_Chr01 BNL2986 Marker Cotton 15,952,145 - 15,952,543 (bp) Automated name-based View Maps
Cotton - E3 - 16 BNL2986 Marker 57.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL2986 Marker 119.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 BNL2986 Marker 46.1 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL2986 Marker 67.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL2986 Marker 58.37 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL2986 Marker 70.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL2986 Marker 71.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 BNL2986 Marker 30.82 (cM) Automated name-based View Maps
BNL0580 Marker 48.3 Cotton - HDC - 16 BNL0580 Marker 72.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL0580 Marker 56.53 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL0580 Marker 78.6 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL0580 Marker 64.88 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL0580 Marker Cotton 15,030,457 - 15,030,838 (bp) Automated name-based View Maps
Cotton - HDC - 7 BNL0580 Marker 87.6 (cM) Automated name-based View Maps
JESPR128 Marker 42.5 Cotton - E3 - 16 JESPR128 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR128 Marker Cotton 17,714,732 - 17,715,061 (bp) Automated name-based View Maps
Cotton - TH - 16 JESPR128 Marker 71.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR128 Marker 112.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 JESPR128 Marker 61.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR128 Marker 64.2 (cM) Automated name-based View Maps
NAU1020 Marker 26.3 Cotton - Graimondii_physical - Gr_Chr01 NAU1020 Marker Cotton 1,376,612 - 1,377,277 (bp) Automated name-based View Maps
Cotton - GVc - 16 NAU1020 Marker 117.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 NAU1020b Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU1020 Marker 115.4 (cM) Automated name-based View Maps
CIR175 Marker 20.4 Cotton - Guazuncho2xVH8-RIL - c16 CIR175 Marker 57.78 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 CIR175 Marker 218.2 (cM) Automated name-based View Maps
Cotton - E3 - 16 CIR175 Marker 10.1 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR175 Marker 122.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU73 Marker 120.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU73 Marker 75.9 (cM) Automated name-based View Maps
Cotton - TH - 14 CIR175 Marker 67.8 (cM) Automated name-based View Maps