CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-CH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 17
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - CH [ View Map Set Info ]
Map Name: 17
Map Start: 0 cM
Map Stop: 166.7 cM
Features by Type:
18 Marker
18 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 18 of 18.
Cotton - CH - 17
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3424 Marker 166.7 Cotton - TH - 2 BNL3424 Marker 112.1 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3424 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3424 Marker Cotton 338,550 - 338,875 (bp) Automated name-based View Maps
Cotton - CH - 2 BNL3424 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3424 Marker 4.8 (cM) Automated name-based View Maps
BNL0834 Marker 148 Cotton - TH - 17 BNL0834 Marker 111.5 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL0834 Marker 26.7 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL0834 Marker 127.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0834 Marker 6.8 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL0834 Marker 70.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL834 Marker 91.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL834 Marker 136.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL0834 Marker 6.75 (cM) Automated name-based View Maps
CIR180 Marker 145.4 Cotton - Guazuncho2xVH8-RIL - c17 CIR180 Marker 40.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR180 Marker 99.5 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR180 Marker 78.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 CIR180 Marker 19.1 (cM) Automated name-based View Maps
BNL3955 Marker 122.3 Cotton - HDC - 6 BNL3955 Marker 87.5 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3955 Marker 44.77 (cM) Automated name-based View Maps
Cotton - PK - c22 BNL3955 Marker 25 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3955 Marker 69.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3955 Marker 64.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL3955 Marker 67.8 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3955 Marker 36.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3955 Marker 143.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3955 Marker Cotton 47,731,898 - 47,732,520 (bp) Automated name-based View Maps
Cotton - PK - c17 BNL3955 Marker 53.5 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3955 Marker 193.3 (cM) Automated name-based View Maps
CIR375 Marker 89.6 Cotton - HDC - 17 CIR375 Marker 58.2 (cM) Automated name-based View Maps
Cotton - E3 - 17 CIR375 Marker 91.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR375 Marker 58.3 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR375 Marker 39.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 CIR375 Marker Cotton 5,895,098 - 5,895,531 (bp) Automated name-based View Maps
BNL2182 Marker 79.2 Cotton - E3 - 17 BNL2182 Marker 83.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2182 Marker 71.6 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2182 Marker 61 (cM) Automated name-based View Maps
CIR038 Marker 76.9 Cotton - E3 - 17 CIR038 Marker 81.7 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR038 Marker 30.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR038 Marker 44.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 CIR038 Marker Cotton 21,801,845 - 21,802,011 (bp) Automated name-based View Maps
Cotton - HDC - 17 CIR038 Marker 68.1 (cM) Automated name-based View Maps
BNL2471 Marker 75.1 Cotton - E3 - 17 BNL2471 Marker 82 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL2471 Marker 30.5 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2471 Marker 50.2 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL2471 Marker 80.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2471 Marker 67.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL2471a Marker 32.88 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL2471 Marker Cotton 22,722,030 - 22,722,271 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL2471 Marker 44.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL2471 Marker 52.3 (cM) Automated name-based View Maps
JESPR172 Marker 72.6 Cotton - HDC - 17 JESPR172 Marker 80.5 (cM) Automated name-based View Maps
Cotton - TH - 17 JESPR172 Marker 53.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 JESPR172 Marker Cotton 33,510,227 - 33,510,680 (bp) Automated name-based View Maps
BNL3590 Marker 72.6 Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
JESPR195 Marker 71.1 Cotton - E3 - 17 JESPR195 Marker 76.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR195 Marker 78.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 JESPR195 Marker 28.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 JESPR195 Marker 24.9 (cM) Automated name-based View Maps
Cotton - GVc - 17 JESPR195 Marker 22.3 (cM) Automated name-based View Maps
JESPR101 Marker 69.6 Cotton - CH - 2 JESPR101 Marker 39 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 JESPR101b Marker 35.67 (cM) Automated name-based View Maps
Cotton - GVc - 17 JESPR101 Marker 28.2 (cM) Automated name-based View Maps
Cotton - TH - 2 JESPR101 Marker 49.7 (cM) Automated name-based View Maps
Cotton - TH - 17 JESPR101 Marker 52.3 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR101 Marker 60.15 (cM) Automated name-based View Maps
Cotton - E3 - 2 JESPR101 Marker 76 (cM) Automated name-based View Maps
Cotton - T3 - 17 JESPR101 Marker 43.57 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 JESPR101a Marker 30.32 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR101 Marker 70.5 (cM) Automated name-based View Maps
Cotton - GVc - 2 JESPR101 Marker 43.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR101 Marker 65.2 (cM) Automated name-based View Maps
BNL4003 Marker 67.9 Cotton - E3 - 17 BNL4003 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU35 Marker 65 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL4003 Marker 43.04 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU35 Marker 71.1 (cM) Automated name-based View Maps
CIR251 Marker 53.3 Cotton - Guazuncho2xVH8-RIL - c17 CIR251 Marker 38.57 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 CIR251 Marker Cotton 4,839,347 - 4,839,545 (bp) Automated name-based View Maps
Cotton - T3 - 17 CIR251 Marker 55.94 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR251 Marker 59.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 CIR251 Marker 58.7 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR251 Marker 38.6 (cM) Automated name-based View Maps
BNL3408 Marker 27.7 Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3408 Marker 96.2 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3408 Marker 110.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
NAU1167 Marker 25 Cotton - T3 - 3 NAU1167 Marker 97.45 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1324 Marker 113 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1167 Marker 63.5 (cM) Automated name-based View Maps
BNL2496 Marker 11.6 Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2496 Marker 7.13 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2496 Marker 7.13 (cM) Automated name-based View Maps
BNL2496 Marker 11.6 Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2496 Marker 7.13 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2496 Marker 7.13 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps