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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 10
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 185.7 cM
Features by Type:
77 Marker
77 Total

Map Features

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Items 1 to 25 of 77.       of 4 | Next
Cotton - E3 - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU2874 Marker 80.1 Cotton - HDC - 10 HAU2874 Marker 73.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 HAU2874 Marker Cotton 45,799,395 - 45,800,195 (bp) Automated name-based View Maps
NAU5438 Marker 80.6 Cotton - HDC - 10 NAU5438 Marker 73.9 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU5438 Marker 64.8 (cM) Automated name-based View Maps
HAU1796 Marker 81.8 Cotton - HDC - 10 CLU1212 Marker 74.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU1212 Marker 83.1 (cM) Automated name-based View Maps
Cotton - E3 - 20 HAU1796 Marker 92.8 (cM) Automated name-based View Maps
STV100 Marker 84.2 Cotton - HDC - 10 CLU3920 Marker 76.1 (cM) Automated name-based View Maps
Cotton - E3 - 20 STV100 Marker 104.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3920 Marker 103.2 (cM) Automated name-based View Maps
BNL1161 Marker 84.6 Cotton - Guazuncho2xVH8-BC2 - c23 BNL1161 Marker 24.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL1161 Marker 76.5 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1161 Marker 57.55 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL1161 Marker 111.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL1161 Marker 97.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL1161a Marker 11.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL1161b Marker 26.55 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL1161 Marker 75.8 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL1161 Marker 125.68 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL1161 Marker 86.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU10 Marker 49.2 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL1161 Marker 63 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL1161 Marker 21.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU10 Marker 76.3 (cM) Automated name-based View Maps
TMB0307 Marker 84.8 Cotton - HDC - 10 TMB0307 Marker 76.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 TMB0307 Marker 57.48 (cM) Automated name-based View Maps
TMB0325 Marker 84.8 Cotton - T3 - 10 TMB0325 Marker 57.39 (cM) Automated name-based View Maps
Cotton - HDC - 10 TMB0325 Marker 76 (cM) Automated name-based View Maps
BNL2705 Marker 85 Cotton - HDC - 10 BNL2705 Marker 76.4 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL2705 Marker 57.66 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL2705 Marker 42.4 (cM) Automated name-based View Maps
BNL2872 Marker 93.7 Cotton - CH - 10 BNL2872 Marker 44.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL2872 Marker Cotton 9,875,587 - 9,875,900 (bp) Automated name-based View Maps
Cotton - HDC - 10 BNL2872 Marker 85.4 (cM) Automated name-based View Maps
CM27 Marker 94.9 Cotton - T3 - 10 CM27 Marker 66.44 (cM) Automated name-based View Maps
Cotton - HDC - 10 CM27 Marker 86.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CM27 Marker Cotton 60,886,095 - 60,886,530 (bp) Automated name-based View Maps
HAU1314 Marker 98.7 Cotton - Graimondii_physical - Gr_Chr11 HAU1314 Marker Cotton 23,071,820 - 23,072,949 (bp) Automated name-based View Maps
Cotton - HDC - 10 HAU1314 Marker 88.2 (cM) Automated name-based View Maps
TMB0858 Marker 100.6 Cotton - HDC - 10 TMB0858 Marker 90.7 (cM) Automated name-based View Maps
Cotton - HDC - 20 TMB0858 Marker 90.8 (cM) Automated name-based View Maps
Cotton - T3 - 20 TMB0858 Marker 59.65 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 TMB0858 Marker Cotton 23,332,194 - 23,332,815 (bp) Automated name-based View Maps
Cotton - T3 - 10 TMB0858 Marker 69.85 (cM) Automated name-based View Maps
BNL3895 Marker 101.6 Cotton - GVc - 10 BNL3895 Marker 71.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL3895 Marker 89.5 (cM) Automated name-based View Maps
Cotton - TH - 10 BNL3895 Marker 60.9 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL3895 Marker 29.6 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL3895 Marker 68.86 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3895 Marker Cotton 23,404,944 - 23,405,314 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL3895 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL3895 Marker 16.05 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL3895 Marker 77.9 (cM) Automated name-based View Maps
NAU6393 Marker 103.6 Cotton - TH - 10 NAU6393 Marker 60.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6393 Marker 90.8 (cM) Automated name-based View Maps
DPL0431 Marker 104 Cotton - Graimondii_physical - Gr_Chr03 DPL0431 Marker Cotton 22,439,652 - 22,440,376 (bp) Automated name-based View Maps
Cotton - HDC - 10 DPL0431 Marker 90.3 (cM) Automated name-based View Maps
Cotton - T3 - 10 DPL0431 Marker 69.58 (cM) Automated name-based View Maps
Gh236 Marker 105.7 Cotton - HDC - 20 Gh236 Marker 87.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gh236 Marker 92.1 (cM) Automated name-based View Maps
Cotton - T3 - 20 Gh236 Marker 62.37 (cM) Automated name-based View Maps
Cotton - E3 - 20 Gh236 Marker 96.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gh236 Marker Cotton 25,069,126 - 25,069,671 (bp) Automated name-based View Maps
Gh573 Marker 108.1 Cotton - HDC - 10 Gh573 Marker 93.6 (cM) Automated name-based View Maps
Cotton - E3 - 24 Gh573 Marker 22.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gh573 Marker Cotton 8,338,875 - 8,339,580 (bp) Automated name-based View Maps
Cotton - HDC - 24 Gh573 Marker 112.7 (cM) Automated name-based View Maps
CIR171 Marker 111 Cotton - GVc - 20 CIR171 Marker 96.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR171 Marker 96.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR171 Marker Cotton 43,500,729 - 43,501,031 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR171a Marker 11.47 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR171b Marker 57.32 (cM) Automated name-based View Maps
Cotton - CH - 10 CIR171 Marker 28.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR171 Marker 54.6 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR171 Marker 78.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR171 Marker 161 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR171 Marker 60.2 (cM) Automated name-based View Maps
BNL1665 Marker 112.5 Cotton - TH - 10 BNL1665 Marker 58.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL1665 Marker Cotton 28,647,035 - 28,647,452 (bp) Automated name-based View Maps
Cotton - T3 - 10 BNL1665 Marker 74.31 (cM) Automated name-based View Maps
Cotton - HDC - 10 BNL1665 Marker 96.4 (cM) Automated name-based View Maps
Cotton - CH - 10 BNL1665 Marker 25.2 (cM) Automated name-based View Maps
CIR400 Marker 113.7 Cotton - GVc - 10 CIR400 Marker 56.1 (cM) Automated name-based View Maps
Cotton - T3 - 10 CIR400 Marker 76.2 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR400 Marker 98.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 CIR400 Marker Cotton 5,565,584 - 5,565,787 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR400 Marker 59.1 (cM) Automated name-based View Maps
BNL4016 Marker 114.3 Cotton - Graimondii_physical - Gr_Chr03 BNL4016 Marker Cotton 26,726,712 - 26,727,191 (bp) Automated name-based View Maps
Cotton - HDC - 10 BNL4016 Marker 98.8 (cM) Automated name-based View Maps
NAU3574 Marker 114.6 Cotton - E3 - 15 NAU3574 Marker 163.4 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3574 Marker 60.3 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3574 Marker 55.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3956 Marker 82 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3956 Marker 97.4 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU3574 Marker 91.2 (cM) Automated name-based View Maps
NAU5362 Marker 115.3 Cotton - TH - 10 NAU5362 Marker 59.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU5362 Marker Cotton 36,787,179 - 36,787,752 (bp) Automated name-based View Maps
Cotton - HDC - 10 NAU5362 Marker 93.6 (cM) Automated name-based View Maps
NAU3013 Marker 115.9 Cotton - HDC - 10 CLU1076 Marker 95.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU1076 Marker 101 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3013 Marker 58.7 (cM) Automated name-based View Maps
HAU3201 Marker 116.5 Cotton - HDC - 10 HAU3201 Marker 101.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 HAU3201 Marker 90.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 HAU3201 Marker Cotton 40,346,151 - 40,346,841 (bp) Automated name-based View Maps
Cotton - E3 - 20 HAU3201 Marker 97.6 (cM) Automated name-based View Maps