CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 12
Map Start: 0 cM
Map Stop: 222.3 cM
Features by Type:
87 Marker
87 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 87.       of 4 | Next
Cotton - E3 - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU0211 Marker 212.1 Cotton - HDC - 12 HAU0211 Marker 114 (cM) Automated name-based View Maps
HAU0780 Marker 213.9 Cotton - HDC - 12 HAU0780 Marker 114.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 HAU0780 Marker Cotton 56,977,842 - 56,978,737 (bp) Automated name-based View Maps
DPL0469 Marker 0 Cotton - T3 - 12 DPL0469 Marker 4.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 DPL0469 Marker Cotton 1,040,470 - 1,041,153 (bp) Automated name-based View Maps
Cotton - HDC - 12 DPL0469 Marker 4.7 (cM) Automated name-based View Maps
HAU0295 Marker 222.3 Cotton - Graimondii_physical - Gr_Chr08 HAU0295 Marker Cotton 55,251,908 - 55,253,052 (bp) Automated name-based View Maps
Cotton - HDC - 12 HAU0295 Marker 119.2 (cM) Automated name-based View Maps
HAU2486 Marker 11.9 Cotton - HDC - 12 CLU1571 Marker 12.8 (cM) Automated name-based View Maps
NAU3862 Marker 15.4 Cotton - TH - 26 NAU3862 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3862 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU3862 Marker 29.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3862 Marker Cotton 3,208,711 - 3,209,504 (bp) Automated name-based View Maps
Cotton - TH - 26 NAU3862 Marker 27.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3862 Marker 31.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU3862 Marker 26.1 (cM) Automated name-based View Maps
NAU3561 Marker 19.8 Cotton - HDC - 12 NAU3561 Marker 16.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3561 Marker Cotton 1,981,232 - 1,981,960 (bp) Automated name-based View Maps
Cotton - TH - 12 NAU3561 Marker 17.1 (cM) Automated name-based View Maps
BNL2578 Marker 32.6 Cotton - HDC - 26 BNL2578 Marker 29.5 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL2578 Marker 25.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL2578 Marker 26.8 (cM) Automated name-based View Maps
HAU2835 Marker 36.6 Cotton - HDC - 12 CLU1703 Marker 29.5 (cM) Automated name-based View Maps
NAU3897 Marker 39.9 Cotton - Graimondii_physical - Gr_Chr08 NAU3897 Marker Cotton 5,422,950 - 5,423,624 (bp) Automated name-based View Maps
Cotton - HDC - 12 NAU3897 Marker 31.7 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU3897 Marker 38.6 (cM) Automated name-based View Maps
Gh568 Marker 44.7 Cotton - E3 - 26 Gh568 Marker 12.3 (cM) Automated name-based View Maps
Cotton - HDC - 26 Gh568 Marker 36 (cM) Automated name-based View Maps
Cotton - T3 - 12 Gh568 Marker 33.74 (cM) Automated name-based View Maps
Cotton - HDC - 12 Gh568 Marker 32.6 (cM) Automated name-based View Maps
MUSB1242 Marker 46.9 Cotton - T3 - 12 MUSB1242 Marker 53.31 (cM) Automated name-based View Maps
Cotton - HDC - 12 MUSB1242 Marker 46.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 MUSB1242 Marker Cotton 5,357,761 - 5,358,507 (bp) Automated name-based View Maps
BNL2657 Marker 48.4 Cotton - HDC - 12 BNL2657 Marker 35.3 (cM) Automated name-based View Maps
BNL2621 Marker 51.8 Cotton - Graimondii_physical - Gr_Chr08 BNL2621 Marker Cotton 6,883,854 - 6,884,405 (bp) Automated name-based View Maps
Cotton - HDC - 12 BNL2621 Marker 37.8 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL2621 Marker 114.1 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL2621 Marker 153.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL2621v Marker 66.57 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL2621 Marker 38.7 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL2621 Marker 18.91 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL2621 Marker 50.5 (cM) Automated name-based View Maps
BNL2768 Marker 55.2 Cotton - HDC - 12 CLU28 Marker 40.3 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL2768 Marker 58.4 (cM) Automated name-based View Maps
JESPR270 Marker 56.2 Cotton - Guazuncho2xVH8-RIL - c12 JESPR270c Marker 64.22 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR270 Marker 88.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU132 Marker 79.5 (cM) Automated name-based View Maps
Cotton - GVc - 12 JESPR270 Marker 111.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR270 Marker 132.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU132 Marker 40.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR270 Marker 78.2 (cM) Automated name-based View Maps
Cotton - TH - 12 JESPR270 Marker 58.8 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU132 Marker 55.3 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR270 Marker 61.6 (cM) Automated name-based View Maps
CM50 Marker 56.7 Cotton - HDC - 26 CLU145 Marker 56.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU145 Marker 39.7 (cM) Automated name-based View Maps
Cotton - T3 - 26 CM50 Marker 24.64 (cM) Automated name-based View Maps
MUSS026 Marker 56.8 Cotton - GVc - 12 MUSS026 Marker 112.2 (cM) Automated name-based View Maps
Cotton - T3 - 12 MUSS026 Marker 39.67 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 MUSS026 Marker Cotton 8,084,596 - 8,085,057 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSS026 Marker 64.79 (cM) Automated name-based View Maps
Cotton - HDC - 12 MUSS026 Marker 38.9 (cM) Automated name-based View Maps
BNL3599 Marker 57.8 Cotton - HDC - 26 BNL3599 Marker 62 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3599 Marker 165.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3599b Marker 62.34 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3599 Marker 137 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3599 Marker 43.8 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL3599 Marker 110.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 BNL3599a Marker 56.74 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL3599 Marker 129.4 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3599 Marker 82.2 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL3599 Marker 56.6 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL3599 Marker 25.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL3599 Marker 153.3 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL3599 Marker 46.61 (cM) Automated name-based View Maps
BNL3867 Marker 60.8 Cotton - CH - 26 BNL3867 Marker 120.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3867 Marker 45 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL3867 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL3867 Marker Cotton 11,943,876 - 11,944,362 (bp) Automated name-based View Maps
Cotton - T3 - 12 BNL3867 Marker 48.46 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3867 Marker 154.4 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL3867 Marker 28.29 (cM) Automated name-based View Maps
BNL2967 Marker 61.5 Cotton - Guazuncho2xVH8-BC1 - c12 BNL2967 Marker 142.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL2967 Marker 55.73 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL2967 Marker Cotton 10,465,052 - 10,465,574 (bp) Automated name-based View Maps
Cotton - HDC - 12 BNL2967 Marker 44.8 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL2967 Marker 102.8 (cM) Automated name-based View Maps
TMB2557 Marker 61.5 Cotton - HDC - 12 TMB2557 Marker 45.1 (cM) Automated name-based View Maps
Cotton - T3 - 12 TMB2557 Marker 49.12 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 TMB2557 Marker Cotton 12,920,468 - 12,921,102 (bp) Automated name-based View Maps
HAU1313 Marker 62.1 Cotton - HDC - 12 CLU1005 Marker 45.1 (cM) Automated name-based View Maps
BNL3835 Marker 63.4 Cotton - GVc - 12 BNL3835 Marker 101 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL3835 Marker 48.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL3835 Marker 43.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL3835 Marker 140.4 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL3835 Marker 47.72 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3835 Marker 152.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3835 Marker 42.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL3835 Marker 95.9 (cM) Automated name-based View Maps
DPL0601 Marker 64.3 Cotton - T3 - 12 DPL0601 Marker 45.09 (cM) Automated name-based View Maps
Cotton - HDC - 12 DPL0601 Marker 42.8 (cM) Automated name-based View Maps