CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 16
Map Start: 0 cM
Map Stop: 152.9 cM
Features by Type:
91 Marker
91 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 91.       of 4 | Next
Cotton - E3 - 16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU5061 Marker 95.6 Cotton - Graimondii_physical - Gr_Chr01 NAU5061 Marker Cotton 20,430,111 - 20,431,041 (bp) Automated name-based View Maps
Cotton - TH - 16 NAU5061 Marker 73.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU5061 Marker 57.7 (cM) Automated name-based View Maps
HAU1527 Marker 94.8 Cotton - HDC - 14 HAU1527 Marker 61.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 HAU1527 Marker Cotton 5,373,667 - 5,374,372 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU1527 Marker 34.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 HAU1527 Marker 58.2 (cM) Automated name-based View Maps
Cotton - E3 - 22 HAU1527 Marker 120.6 (cM) Automated name-based View Maps
Cotton - E3 - 14 HAU1527 Marker 35.3 (cM) Automated name-based View Maps
DPL0342 Marker 92.7 Cotton - T3 - 16 DPL0342 Marker 71.33 (cM) Automated name-based View Maps
Cotton - HDC - 16 DPL0342 Marker 59.6 (cM) Automated name-based View Maps
Gh684 Marker 89.9 Cotton - T3 - 16 Gh684 Marker 47.19 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 61.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 75.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU303 Marker 80.2 (cM) Automated name-based View Maps
BNL3287 Marker 88.1 Cotton - HDC - 16 BNL3287 Marker 62.5 (cM) Automated name-based View Maps
TMB1820 Marker 87.1 Cotton - Graimondii_physical - Gr_Chr01 TMB1820 Marker Cotton 19,109,355 - 19,110,011 (bp) Automated name-based View Maps
Cotton - HDC - 16 TMB1820 Marker 63.1 (cM) Automated name-based View Maps
Cotton - T3 - 16 TMB1820 Marker 67.71 (cM) Automated name-based View Maps
NAU2556 Marker 86.6 Cotton - Graimondii_physical - Gr_Chr01 NAU2556 Marker Cotton 48,144,717 - 48,145,514 (bp) Automated name-based View Maps
Cotton - TH - 16 NAU2556 Marker 109.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU2556 Marker 33 (cM) Automated name-based View Maps
JESPR128 Marker 86.5 Cotton - CH - 16 JESPR128 Marker 42.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR128 Marker Cotton 17,714,732 - 17,715,061 (bp) Automated name-based View Maps
Cotton - HDC - 16 JESPR128 Marker 61.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR128 Marker 64.2 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR128 Marker 71.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR128 Marker 112.7 (cM) Automated name-based View Maps
Gh055 Marker 82.5 Cotton - HDC - 12 Gh055 Marker 49.6 (cM) Automated name-based View Maps
Cotton - E3 - 13 Gh055 Marker 141.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 Gh055 Marker 47.2 (cM) Automated name-based View Maps
Cotton - T3 - 18 Gh055 Marker 62.44 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gh055 Marker Cotton 47,360,885 - 47,361,438 (bp) Automated name-based View Maps
Cotton - HDC - 26 Gh055 Marker 42.7 (cM) Automated name-based View Maps
Cotton - E3 - 18 Gh055 Marker 57.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 Gh055 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gh055 Marker 72.1 (cM) Automated name-based View Maps
Cotton - E3 - 7 Gh055 Marker 49.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gh055 Marker 68.1 (cM) Automated name-based View Maps
Cotton - E3 - 26 Gh055 Marker 17.4 (cM) Automated name-based View Maps
Cotton - E3 - 12 Gh055 Marker 83.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 Gh055 Marker 57.3 (cM) Automated name-based View Maps
HAU1669 Marker 80.1 Cotton - HDC - 16 HAU1669 Marker 70.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 HAU1669 Marker Cotton 9,302,147 - 9,302,485 (bp) Automated name-based View Maps
BNL0580 Marker 78.6 Cotton - HDC - 7 BNL0580 Marker 87.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL0580 Marker 56.53 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL0580 Marker 72.4 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL0580 Marker 64.88 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL0580 Marker 48.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL0580 Marker Cotton 15,030,457 - 15,030,838 (bp) Automated name-based View Maps
NAU2627 Marker 77.3 Cotton - HDC - 16 NAU2627 Marker 79.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU2627 Marker Cotton 11,809,625 - 11,810,384 (bp) Automated name-based View Maps
Cotton - TH - 16 NAU2627 Marker 62.9 (cM) Automated name-based View Maps
NAU2881 Marker 76 Cotton - Graimondii_physical - Gr_Chr04 NAU2881 Marker Cotton 54,164,669 - 54,165,483 (bp) Automated name-based View Maps
Cotton - HDC - 8 NAU2881 Marker 62.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU2881 Marker 80 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU2881 Marker 54.2 (cM) Automated name-based View Maps
NAU2628 Marker 74.7 Cotton - TH - 16 NAU2628 Marker 62.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU2628 Marker 80.2 (cM) Automated name-based View Maps
JESPR102 Marker 74.4 Cotton - Guazuncho2xVH8-BC1 - c16 JESPR102 Marker 127.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 75.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR102 Marker 101.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 61.4 (cM) Automated name-based View Maps
Cotton - CH - 16 JESPR102 Marker 75.7 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR102 Marker 63.8 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR102 Marker 67.3 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR102 Marker 47.06 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU303 Marker 80.2 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR102 Marker 78 (cM) Automated name-based View Maps
BNL3008 Marker 74.4 Cotton - T3 - 16 BNL3008 Marker 49.75 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3008 Marker 79.7 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3008 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3008 Marker Cotton 12,327,665 - 12,327,992 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL3008 Marker 127.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL3008 Marker 78.6 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL3008 Marker 63.2 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL3008 Marker 69 (cM) Automated name-based View Maps
BNL2734 Marker 74.4 Cotton - Graimondii_physical - Gr_Chr01 BNL2734 Marker Cotton 12,287,050 - 12,287,438 (bp) Automated name-based View Maps
Cotton - CH - 16 BNL2734 Marker 69.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL2734 Marker 80.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL2734 Marker 36.4 (cM) Automated name-based View Maps
NAU5408 Marker 73.5 Cotton - TH - 16 NAU5408 Marker 59.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU5408 Marker Cotton 10,888,112 - 10,888,788 (bp) Automated name-based View Maps
Cotton - HDC - 16 NAU5408 Marker 82.3 (cM) Automated name-based View Maps
NAU2620 Marker 73.3 Cotton - HDC - 16 NAU2620 Marker 81.1 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU2620 Marker 61.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU2620 Marker Cotton 11,166,809 - 11,167,484 (bp) Automated name-based View Maps
DPL0511 Marker 73.2 Cotton - T3 - 16 DPL0511 Marker 44.32 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0511 Marker Cotton 9,768,339 - 9,768,953 (bp) Automated name-based View Maps
Cotton - HDC - 16 DPL0511 Marker 85.1 (cM) Automated name-based View Maps
NAU3594 Marker 73 Cotton - HDC - 16 NAU3594 Marker 81.8 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU3594 Marker 60.5 (cM) Automated name-based View Maps
CIR107 Marker 72.3 Cotton - Guazuncho2xVH8-BC1 - c16 CIR107 Marker 165.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 CIR107 Marker 41.89 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR107 Marker 89.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 CIR107 Marker 43.12 (cM) Automated name-based View Maps
Cotton - CH - 16 CIR107 Marker 78.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 CIR107 Marker 86.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR107 Marker Cotton 8,839,579 - 8,839,829 (bp) Automated name-based View Maps
NAU2721 Marker 71.9 Cotton - TH - 16 NAU2721 Marker 54.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU2721 Marker Cotton 9,657,250 - 9,658,075 (bp) Automated name-based View Maps
Cotton - HDC - 16 NAU2721 Marker 86.2 (cM) Automated name-based View Maps
HAU1195 Marker 71.3 Cotton - Graimondii_physical - Gr_Chr01 HAU1195 Marker Cotton 8,709,542 - 8,710,689 (bp) Automated name-based View Maps
Cotton - HDC - 16 HAU1195 Marker 82.9 (cM) Automated name-based View Maps
HAU1520 Marker 70.4 Cotton - HDC - 16 HAU1520 Marker 83.4 (cM) Automated name-based View Maps