CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 18
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 18
Map Start: 0 cM
Map Stop: 136.9 cM
Features by Type:
88 Marker
88 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 88.       of 4 | Next
Cotton - E3 - 18
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gh525 Marker 103 Cotton - Graimondii_physical - Gr_Chr13 Gh525 Marker Cotton 5,174,213 - 5,174,916 (bp) Automated name-based View Maps
Cotton - HDC - 18 Gh525 Marker 38.4 (cM) Automated name-based View Maps
Cotton - T3 - 18 Gh525 Marker 30.36 (cM) Automated name-based View Maps
HAU0083 Marker 104 Cotton - Graimondii_physical - Gr_Chr13 HAU0083 Marker Cotton 30,529,381 - 30,530,004 (bp) Automated name-based View Maps
Cotton - HDC - 18 HAU0083 Marker 37.6 (cM) Automated name-based View Maps
HAU0693 Marker 105.2 Cotton - HDC - 18 CLU686 Marker 36.5 (cM) Automated name-based View Maps
NAU3203 Marker 105.9 Cotton - HDC - 18 NAU3203 Marker 35.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 NAU3203 Marker 45.3 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU3203 Marker 85.5 (cM) Automated name-based View Maps
Cotton - TH - 13 NAU3203 Marker 72.9 (cM) Automated name-based View Maps
MUSB0685 Marker 110.3 Cotton - T3 - 13 MUSB0685 Marker 109.28 (cM) Automated name-based View Maps
Cotton - T3 - 18 MUSB0685 Marker 54.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 MUSB0685 Marker 64.5 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0685 Marker 104.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 MUSB0685 Marker Cotton 43,363,005 - 43,363,917 (bp) Automated name-based View Maps
BNL2544 Marker 110.7 Cotton - HDC - 18 BNL2544 Marker 25 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL2544 Marker 15.02 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL2544 Marker 96.69 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL2544 Marker Cotton 2,763,024 - 2,763,571 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL2544 Marker 141 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL2544 Marker 117 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL2544 Marker 94.6 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL2544 Marker 152.5 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL2544 Marker 0 (cM) Automated name-based View Maps
NAU2697 Marker 111 Cotton - HDC - 18 NAU2697 Marker 33.1 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU2697 Marker 87.9 (cM) Automated name-based View Maps
HAU0100 Marker 111.2 Cotton - HDC - 18 HAU0100 Marker 27.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 HAU0100 Marker Cotton 2,909,330 - 2,910,110 (bp) Automated name-based View Maps
HAU2497 Marker 112.1 Cotton - HDC - 18 CLU1577 Marker 26 (cM) Automated name-based View Maps
NAU3011 Marker 114.8 Cotton - Graimondii_physical - Gr_Chr13 NAU3011 Marker Cotton 2,494,939 - 2,495,782 (bp) Automated name-based View Maps
Cotton - HDC - 18 NAU3011 Marker 21.7 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU3011 Marker 99.1 (cM) Automated name-based View Maps
BNL0193 Marker 115.2 Cotton - Guazuncho2xVH8-BC2 - c18 BNL193 Marker 87.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL193 Marker 143.3 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL0193 Marker 101.4 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL0193 Marker 119.9 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL0193 Marker 25.9 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL0193 Marker 19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL0193u Marker 60.74 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL0193 Marker 10.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0193 Marker 44.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL0193 Marker 99.65 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL0193 Marker 107.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL0193 Marker Cotton 2,517,246 - 2,517,541 (bp) Automated name-based View Maps
NAU3943 Marker 115.8 Cotton - HDC - 18 NAU3943 Marker 20.8 (cM) Automated name-based View Maps
NAU4103 Marker 118.2 Cotton - HDC - 18 CLU4611 Marker 50 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU4103 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 CLU4611 Marker 51.3 (cM) Automated name-based View Maps
HAU2631 Marker 126 Cotton - HDC - 13 CLU1624 Marker 24.4 (cM) Automated name-based View Maps
Cotton - E3 - 13 HAU2631 Marker 176.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 CLU1624 Marker 11.9 (cM) Automated name-based View Maps
NAU6582 Marker 129.1 Cotton - TH - 18 NAU6582 Marker 114.9 (cM) Automated name-based View Maps
Cotton - TH - 13 NAU6582 Marker 111.5 (cM) Automated name-based View Maps
Cotton - HDC - 13 NAU6582 Marker 22.1 (cM) Automated name-based View Maps
Cotton - HDC - 18 NAU6582 Marker 9.2 (cM) Automated name-based View Maps
HAU0250 Marker 132.5 Cotton - HDC - 13 CLU493 Marker 18.5 (cM) Automated name-based View Maps
Cotton - HDC - 18 CLU493 Marker 8.2 (cM) Automated name-based View Maps
Cotton - E3 - 13 HAU0250 Marker 185.7 (cM) Automated name-based View Maps
HAU1086 Marker 0 Cotton - HDC - 18 HAU1086 Marker 110.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 HAU1086 Marker Cotton 58,137,512 - 58,139,031 (bp) Automated name-based View Maps
NAU3785 Marker 135.3 Cotton - HDC - 18 CLU1082 Marker 7.3 (cM) Automated name-based View Maps
MUSB1135 Marker 6 Cotton - Graimondii_physical - Gr_Chr13 MUSB1135 Marker Cotton 57,314,921 - 57,315,870 (bp) Automated name-based View Maps
Cotton - HDC - 13 MUSB1135 Marker 122.9 (cM) Automated name-based View Maps
Cotton - HDC - 18 MUSB1135 Marker 105.8 (cM) Automated name-based View Maps
Cotton - T3 - 18 MUSB1135 Marker 97.79 (cM) Automated name-based View Maps
Cotton - E3 - 13 MUSB1135 Marker 18.1 (cM) Automated name-based View Maps
TMB2762 Marker 136.9 Cotton - T3 - 18 TMB2762 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 TMB2762 Marker Cotton 1,142,604 - 1,143,151 (bp) Automated name-based View Maps
Cotton - HDC - 18 TMB2762 Marker 6.9 (cM) Automated name-based View Maps
NAU3991 Marker 8.8 Cotton - Graimondii_physical - Gr_Chr13 NAU3991 Marker Cotton 57,169,138 - 57,169,787 (bp) Automated name-based View Maps
Cotton - HDC - 18 NAU3991 Marker 104.9 (cM) Automated name-based View Maps
Cotton - HDC - 13 NAU3991 Marker 121 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU3991 Marker 2.5 (cM) Automated name-based View Maps
Cotton - E3 - 13 NAU3991 Marker 21.7 (cM) Automated name-based View Maps
NAU2980 Marker 9.6 Cotton - HDC - 19 NAU2980 Marker 102.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 NAU2980 Marker 104.6 (cM) Automated name-based View Maps
Cotton - TH - 18 NAU2980 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 19 NAU2980 Marker 115.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 NAU2980 Marker Cotton 57,543,963 - 57,544,725 (bp) Automated name-based View Maps
JESPR246 Marker 16 Cotton - Graimondii_physical - Gr_Chr13 JESPR246 Marker Cotton 56,968,674 - 56,969,013 (bp) Automated name-based View Maps
Cotton - TH - 18 JESPR246 Marker 5.9 (cM) Automated name-based View Maps
Cotton - HDC - 18 JESPR246 Marker 102.5 (cM) Automated name-based View Maps
HAU2276 Marker 18.2 Cotton - HDC - 18 CLU1207 Marker 101.8 (cM) Automated name-based View Maps
Cotton - HDC - 18 CLU1269 Marker 99.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU1207 Marker 137.4 (cM) Automated name-based View Maps
HAU0209 Marker 20.4 Cotton - HDC - 18 HAU0209 Marker 101.1 (cM) Automated name-based View Maps