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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
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Maps 20
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 20
Map Start: 0 cM
Map Stop: 160.9 cM
Features by Type:
96 Marker
96 Total

Map Features

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Items 1 to 25 of 96.       of 4 | Next
Cotton - E3 - 20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TMB1838 Marker 90.8 Cotton - T3 - 20 TMB1838 Marker 67.35 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU101 Marker 82.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU101 Marker 134 (cM) Automated name-based View Maps
BNL3993 Marker 90.9 Cotton - HDC - 13 BNL3993 Marker 46.6 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3993 Marker 93.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3993 Marker 158.3 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL3993 Marker 70.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3993 Marker Cotton 38,859,462 - 38,859,844 (bp) Automated name-based View Maps
Cotton - CH - 20 BNL3993 Marker 48.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3993 Marker 80.5 (cM) Automated name-based View Maps
HAU2178 Marker 90.9 Cotton - HDC - 20 CLU1392 Marker 82.5 (cM) Automated name-based View Maps
MUSB0831 Marker 90.9 Cotton - T3 - 10 MUSB0831 Marker 80.94 (cM) Automated name-based View Maps
Cotton - HDC - 10 MUSB0831 Marker 105.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 MUSB0831 Marker Cotton 32,799,334 - 32,800,147 (bp) Automated name-based View Maps
Cotton - HDC - 20 MUSB0831 Marker 82.5 (cM) Automated name-based View Maps
MUSS319 Marker 90.9 Cotton - HDC - 20 MUSS319 Marker 82.5 (cM) Automated name-based View Maps
Gh119 Marker 91 Cotton - T3 - 20 Gh119 Marker 65.42 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gh119 Marker Cotton 34,735,907 - 34,736,702 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gh119 Marker 84.5 (cM) Automated name-based View Maps
NAU3574 Marker 91.2 Cotton - HDC - 20 CLU3956 Marker 82 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU3956 Marker 97.4 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3574 Marker 60.3 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3574 Marker 163.4 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU3574 Marker 114.6 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU3574 Marker 55.8 (cM) Automated name-based View Maps
JESPR171 Marker 91.6 Cotton - TH - 5 JESPR171 Marker 137.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 JESPR171 Marker Cotton 31,488,028 - 31,488,409 (bp) Automated name-based View Maps
Cotton - HDC - 20 JESPR171 Marker 82.5 (cM) Automated name-based View Maps
Cotton - T3 - 20 JESPR171 Marker 67.6 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR171 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 JESPR171 Marker 154.3 (cM) Automated name-based View Maps
Cotton - GVc - 20 JESPR171 Marker 90.6 (cM) Automated name-based View Maps
HAU1796 Marker 92.8 Cotton - E3 - 10 HAU1796 Marker 81.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU1212 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU1212 Marker 74.8 (cM) Automated name-based View Maps
NAU2579 Marker 93.5 Cotton - TH - 20 NAU2579 Marker 59.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2579 Marker Cotton 29,253,917 - 29,254,736 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU2579 Marker 82.2 (cM) Automated name-based View Maps
BNL0946 Marker 93.7 Cotton - GVc - 20 BNL0946 Marker 89.3 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL0946 Marker 47.2 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL0946 Marker 57.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL0946 Marker 83.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL0946 Marker 54.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL946 Marker 148 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL0946 Marker 66.32 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL946 Marker 65.9 (cM) Automated name-based View Maps
BNL3660 Marker 94.2 Cotton - HDC - 20 BNL3660 Marker 84.7 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL3660 Marker 54.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3660 Marker Cotton 28,511,693 - 28,512,188 (bp) Automated name-based View Maps
Gh424 Marker 94.8 Cotton - T3 - 20 Gh424 Marker 63.87 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU263 Marker 86.1 (cM) Automated name-based View Maps
DPL0135 Marker 95.3 Cotton - Graimondii_physical - Gr_Chr11 DPL0135 Marker Cotton 28,724,363 - 28,725,145 (bp) Automated name-based View Maps
Cotton - HDC - 20 DPL0135 Marker 83.4 (cM) Automated name-based View Maps
Cotton - T3 - 20 DPL0135 Marker 66.49 (cM) Automated name-based View Maps
Gh236 Marker 96.2 Cotton - T3 - 20 Gh236 Marker 62.37 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gh236 Marker 92.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gh236 Marker Cotton 25,069,126 - 25,069,671 (bp) Automated name-based View Maps
Cotton - E3 - 10 Gh236 Marker 105.7 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gh236 Marker 87.7 (cM) Automated name-based View Maps
TMB0281 Marker 96.6 Cotton - Graimondii_physical - Gr_Chr11 TMB0281 Marker Cotton 34,629,249 - 34,629,972 (bp) Automated name-based View Maps
Cotton - HDC - 20 TMB0281 Marker 88.6 (cM) Automated name-based View Maps
HAU3201 Marker 97.6 Cotton - E3 - 10 HAU3201 Marker 116.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 HAU3201 Marker Cotton 40,346,151 - 40,346,841 (bp) Automated name-based View Maps
Cotton - HDC - 20 HAU3201 Marker 90.6 (cM) Automated name-based View Maps
Cotton - HDC - 10 HAU3201 Marker 101.8 (cM) Automated name-based View Maps
Gh511 Marker 98.5 Cotton - HDC - 20 CLU245 Marker 99.8 (cM) Automated name-based View Maps
Cotton - T3 - 20 Gh511 Marker 51.81 (cM) Automated name-based View Maps
BNL2689 Marker 99.6 Cotton - HDC - 20 BNL2689 Marker 94.8 (cM) Automated name-based View Maps
BNL3948 Marker 99.8 Cotton - HDC - 9 BNL3948 Marker 42.2 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3948 Marker 60.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3948 Marker 135.2 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL3948 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3948 Marker 59.3 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3948 Marker 82.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3948 Marker Cotton 21,157,864 - 21,158,296 (bp) Automated name-based View Maps
Cotton - PK - c9 BNL3948 Marker 40 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3948 Marker 89.7 (cM) Automated name-based View Maps
CIR121 Marker 100.9 Cotton - CH - 20 CIR121 Marker 69.9 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR121 Marker 72.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 CIR121 Marker 44.03 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR121 Marker Cotton 13,994,355 - 13,994,586 (bp) Automated name-based View Maps
Cotton - T3 - 20 CIR121 Marker 49.44 (cM) Automated name-based View Maps
Cotton - HDC - 20 CIR121 Marker 102.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 CIR121 Marker 116.2 (cM) Automated name-based View Maps
BNL3838 Marker 101.6 Cotton - GVc - 20 BNL3838 Marker 68.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3838 Marker 102.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3838 Marker Cotton 14,104,683 - 14,104,922 (bp) Automated name-based View Maps
Cotton - CH - 20 BNL3838 Marker 70 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3838 Marker 117.5 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3838 Marker 49.66 (cM) Automated name-based View Maps
NAU3531 Marker 101.6 Cotton - HDC - 20 CLU4396 Marker 98.9 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3531 Marker 54 (cM) Automated name-based View Maps
JESPR261 Marker 101.7 Cotton - HDC - 10 JESPR261 Marker 114.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 JESPR261 Marker Cotton 15,327,215 - 15,327,409 (bp) Automated name-based View Maps
Cotton - CH - 10 JESPR261 Marker 28.8 (cM) Automated name-based View Maps
Cotton - T3 - 10 JESPR261 Marker 87.27 (cM) Automated name-based View Maps
Cotton - HDC - 20 JESPR261 Marker 99 (cM) Automated name-based View Maps
HAU2200 Marker 102.1 Cotton - HDC - 20 CLU1194 Marker 99.4 (cM) Automated name-based View Maps