CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 147.2 cM
Features by Type:
53 Marker
53 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 53.       of 3 | Next
Cotton - E3 - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU3485 Marker 70.6 Cotton - HDC - 14 NAU3485 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3485 Marker 53.1 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU3485 Marker 55.7 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU3485 Marker 72.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU3485 Marker Cotton 9,214,657 - 9,215,376 (bp) Automated name-based View Maps
Cotton - E3 - 14 NAU3485 Marker 52.1 (cM) Automated name-based View Maps
BNL2651 Marker 69.6 Cotton - TH - 14 BNL2651 Marker 77.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL2651 Marker 78.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL2651 Marker Cotton 7,137,496 - 7,137,958 (bp) Automated name-based View Maps
Cotton - TH - 2 BNL2651 Marker 49.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL2651 Marker 66.2 (cM) Automated name-based View Maps
NAU3189 Marker 68.9 Cotton - HDC - 26 NAU3189 Marker 62.7 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU3189 Marker 58 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3189 Marker 50.5 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU3189 Marker 77.2 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU3189 Marker 29.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3189 Marker Cotton 8,487,770 - 8,488,502 (bp) Automated name-based View Maps
Cotton - HDC - 14 NAU3189 Marker 78.4 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU3189 Marker 52.5 (cM) Automated name-based View Maps
HAU2917 Marker 68.3 Cotton - HDC - 2 CLU1731 Marker 68.2 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU1731 Marker 78 (cM) Automated name-based View Maps
Cotton - E3 - 14 HAU2917 Marker 55.5 (cM) Automated name-based View Maps
Gh669 Marker 67.3 Cotton - T3 - 2 Gh669 Marker 70.79 (cM) Automated name-based View Maps
Cotton - HDC - 2 Gh669 Marker 68.3 (cM) Automated name-based View Maps
NAU5134 Marker 65.6 Cotton - HDC - 2 NAU5134 Marker 57.1 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU5134 Marker 52.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU5134 Marker Cotton 18,049,628 - 18,050,554 (bp) Automated name-based View Maps
HAU1980 Marker 60.6 Cotton - HDC - 14 HAU1980 Marker 77.7 (cM) Automated name-based View Maps
Cotton - E3 - 14 HAU1980 Marker 53.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 HAU1980 Marker 76.7 (cM) Automated name-based View Maps
BNL1897 Marker 59.9 Cotton - GVc - 14 BNL1897 Marker 32.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL1897 Marker 95.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL1897 Marker 15.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL1897 Marker 35.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL1897 Marker Cotton 5,570,077 - 5,570,292 (bp) Automated name-based View Maps
Cotton - TH - 2 BNL1897 Marker 41.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL1897 Marker 18.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL1897 Marker 86.46 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL1897 Marker 23.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL1897a Marker 18.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL1897 Marker 80.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1897b Marker 36 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL1897 Marker 28.3 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL1897 Marker 69.1 (cM) Automated name-based View Maps
BNL3512 Marker 59.4 Cotton - T3 - 2 BNL3512 Marker 84.15 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3512 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU39 Marker 78.2 (cM) Automated name-based View Maps
HAU0296 Marker 58.4 Cotton - Graimondii_physical - Gr_Chr05 HAU0296 Marker Cotton 22,835,710 - 22,836,722 (bp) Automated name-based View Maps
Cotton - HDC - 2 HAU0296 Marker 78.9 (cM) Automated name-based View Maps
BNL3547 Marker 57.3 Cotton - HDC - 2 CLU39 Marker 78.2 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3547 Marker 72.4 (cM) Automated name-based View Maps
TMB2386 Marker 51.5 Cotton - HDC - 24 TMB2386 Marker 64.2 (cM) Automated name-based View Maps
Cotton - E3 - 14 TMB2386 Marker 92.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 TMB2386 Marker 117.2 (cM) Automated name-based View Maps
Cotton - T3 - 2 TMB2386 Marker 89.84 (cM) Automated name-based View Maps
Cotton - E3 - 24 TMB2386 Marker 79.9 (cM) Automated name-based View Maps
Cotton - HDC - 2 TMB2386 Marker 84 (cM) Automated name-based View Maps
BNL4060 Marker 45.5 Cotton - HDC - 2 CLU39 Marker 78.2 (cM) Automated name-based View Maps
BNL1434 Marker 37.6 Cotton - Guazuncho2xVH8-RIL - c2 BNL1434b Marker 10.76 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL1434 Marker 15.3 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL1434 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL1434 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL1434 Marker 89.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL1434 Marker 15.5 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL1434 Marker 95.17 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL1434 Marker 16.7 (cM) Automated name-based View Maps
CIR381 Marker 29.7 Cotton - Guazuncho2xVH8-BC1 - c2 CIR381 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 2 CIR381 Marker 104.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR381b Marker 25.16 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR381 Marker 103.4 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR381 Marker 23 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 CIR381a Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 4 CIR381 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR381 Marker 16.3 (cM) Automated name-based View Maps
Cotton - GVc - 2 CIR381 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 4 CIR381 Marker 24.8 (cM) Automated name-based View Maps
TMB1738 Marker 10 Cotton - HDC - 14 CLU40 Marker 121.2 (cM) Automated name-based View Maps
Cotton - T3 - 2 TMB1738 Marker 118.38 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU40 Marker 111.6 (cM) Automated name-based View Maps
NAU3535 Marker 0 Cotton - TH - 2 NAU3535 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3535 Marker 126 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU3535 Marker Cotton 171,637 - 172,389 (bp) Automated name-based View Maps
BNL2877 Marker 2.9 Cotton - Graimondii_physical - Gr_Chr05 BNL2877 Marker Cotton 544,698 - 545,241 (bp) Automated name-based View Maps
Cotton - HDC - 2 BNL2877 Marker 121.8 (cM) Automated name-based View Maps
HAU2001 Marker 147.2 Cotton - Graimondii_physical - Gr_Chr03 HAU2001 Marker Cotton 417,497 - 418,072 (bp) Automated name-based View Maps
Cotton - HDC - 2 HAU2001 Marker 2.8 (cM) Automated name-based View Maps
NAU3775 Marker 142.3 Cotton - HDC - 2 NAU3775 Marker 6.9 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU3775 Marker 109.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU3775 Marker Cotton 376,214 - 376,954 (bp) Automated name-based View Maps
NAU3419 Marker 135.1 Cotton - HDC - 2 CLU3890 Marker 7.6 (cM) Automated name-based View Maps
NAU2858 Marker 124.6 Cotton - TH - 2 NAU2858 Marker 107.5 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU2858 Marker 8.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU2858 Marker Cotton 687,093 - 687,793 (bp) Automated name-based View Maps
BNL0663 Marker 116.1 Cotton - T3 - 2 BNL0663 Marker 16.59 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL0663 Marker 21.6 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL0663 Marker 11.1 (cM) Automated name-based View Maps
JESPR304 Marker 108.6 Cotton - CH - 2 JESPR304 Marker 15.8 (cM) Automated name-based View Maps
Cotton - TH - 2 JESPR304 Marker 88.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR304 Marker 36.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 JESPR304 Marker Cotton 4,456,642 - 4,457,058 (bp) Automated name-based View Maps
Cotton - TH - 17 JESPR304 Marker 99.8 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR304 Marker 26.3 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR304 Marker 21.25 (cM) Automated name-based View Maps
CIR376 Marker 108.6 Cotton - Guazuncho2xVH8-BC1 - c2 CIR376 Marker 156.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 CIR376 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 CIR376a Marker 15.39 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU108 Marker 22.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU108 Marker 41.1 (cM) Automated name-based View Maps
Cotton - CH - 8 CIR376 Marker 50.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR376 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 8 CIR376 Marker 35.4 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU108 Marker 70.3 (cM) Automated name-based View Maps
Cotton - CH - 2 CIR376 Marker 63.9 (cM) Automated name-based View Maps
Cotton - CH - 2 CIR376 Marker 23.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR376 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU108 Marker 141.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 CIR376c Marker 62.57 (cM) Automated name-based View Maps
Cotton - GVc - 2 CIR376 Marker 85.3 (cM) Automated name-based View Maps