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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Cotton-E3
(Reference Set)
Min.
Correspondences
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Maps 3
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 162 cM
Features by Type:
65 Marker
65 Total

Map Features

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Items 1 to 25 of 65.       of 3 | Next
Cotton - E3 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU0604 Marker 88 Cotton - HDC - 3 CLU644 Marker 75.3 (cM) Automated name-based View Maps
TMB2069 Marker 89.5 Cotton - T3 - 3 TMB2069 Marker 79.61 (cM) Automated name-based View Maps
Cotton - HDC - 17 TMB2069 Marker 75.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB2069 Marker Cotton 36,776,700 - 36,777,273 (bp) Automated name-based View Maps
Cotton - HDC - 3 TMB2069 Marker 92.3 (cM) Automated name-based View Maps
Cotton - T3 - 17 TMB2069 Marker 38.05 (cM) Automated name-based View Maps
HAU0992 Marker 87.2 Cotton - HDC - 3 CLU838 Marker 75.9 (cM) Automated name-based View Maps
BNL1379 Marker 85.9 Cotton - HDC - 3 BNL1379 Marker 87.1 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL1379 Marker 75.31 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL1379 Marker Cotton 33,964,941 - 33,965,354 (bp) Automated name-based View Maps
DPL0901 Marker 85.4 Cotton - E3 - 14 DPL0901 Marker 24.3 (cM) Automated name-based View Maps
Cotton - HDC - 14 DPL0901 Marker 51.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DPL0901 Marker Cotton 20,312,451 - 20,313,129 (bp) Automated name-based View Maps
Cotton - HDC - 3 DPL0901 Marker 77.3 (cM) Automated name-based View Maps
Cotton - T3 - 3 DPL0901 Marker 66.88 (cM) Automated name-based View Maps
NAU3382 Marker 84.4 Cotton - TH - 5 NAU3382 Marker 165.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU1381 Marker 35.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 NAU3382 Marker 178.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1381 Marker 77.9 (cM) Automated name-based View Maps
BNL3267 Marker 83.8 Cotton - HDC - 14 BNL3267 Marker 68 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3267 Marker 76.8 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3267 Marker 66.45 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3267 Marker 79.5 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3267 Marker 72.83 (cM) Automated name-based View Maps
NAU3394 Marker 83.5 Cotton - HDC - 3 CLU2758 Marker 78.2 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU3394 Marker 22.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU2758 Marker 93.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU2758 Marker 82.9 (cM) Automated name-based View Maps
BNL3441 Marker 83.4 Cotton - TH - 3 BNL3441 Marker 23.3 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3441 Marker 35.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3441 Marker 68.58 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3441 Marker 39.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3441 Marker Cotton 31,875,965 - 31,876,681 (bp) Automated name-based View Maps
Cotton - CH - 3 BNL3441 Marker 19 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3441 Marker 79.2 (cM) Automated name-based View Maps
NAU2929 Marker 83.3 Cotton - HDC - 3 NAU2929 Marker 78.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU2929 Marker 77 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU2929 Marker 70.2 (cM) Automated name-based View Maps
NAU2928 Marker 83.3 Cotton - HDC - 3 CLU1139 Marker 78.6 (cM) Automated name-based View Maps
TMB2826 Marker 83.1 Cotton - HDC - 3 TMB2826 Marker 78.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 TMB2826 Marker 68.18 (cM) Automated name-based View Maps
MUSS444 Marker 83 Cotton - HDC - 3 CLU2948 Marker 78.8 (cM) Automated name-based View Maps
NAU3671 Marker 81.9 Cotton - HDC - 3 NAU3671 Marker 80 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU3671 Marker Cotton 19,748,429 - 19,749,188 (bp) Automated name-based View Maps
Cotton - TH - 3 NAU3671 Marker 12.3 (cM) Automated name-based View Maps
NAU5443 Marker 80.1 Cotton - HDC - 17 CLU1853 Marker 75.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1853 Marker 81.8 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU5443 Marker 79.7 (cM) Automated name-based View Maps
NAU3309 Marker 79.3 Cotton - HDC - 3 CLU4319 Marker 82.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU4319 Marker 75.1 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU3309 Marker 79.7 (cM) Automated name-based View Maps
HAU1624 Marker 76.5 Cotton - HDC - 3 CLU1139 Marker 78.6 (cM) Automated name-based View Maps
HAU3176 Marker 72.7 Cotton - HDC - 3 CLU1853 Marker 81.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU1853 Marker 75.1 (cM) Automated name-based View Maps
Cotton - E3 - 17 HAU3176 Marker 79.1 (cM) Automated name-based View Maps
HAU2860 Marker 71.1 Cotton - HDC - 3 HAU2860 Marker 91.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 HAU2860 Marker 63.8 (cM) Automated name-based View Maps
Cotton - E3 - 17 HAU2860 Marker 90.1 (cM) Automated name-based View Maps
HAU0920 Marker 66.5 Cotton - Graimondii_physical - Gr_Chr03 HAU0920 Marker Cotton 38,874,824 - 38,876,711 (bp) Automated name-based View Maps
Cotton - HDC - 3 HAU0920 Marker 95.9 (cM) Automated name-based View Maps
JESPR303 Marker 65.7 Cotton - HDC - 3 JESPR303 Marker 96.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 JESPR303 Marker Cotton 54,286,642 - 54,286,928 (bp) Automated name-based View Maps
CIR030 Marker 63.8 Cotton - HDC - 3 CIR030 Marker 98.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR030 Marker 9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 CIR030 Marker 8.95 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR030 Marker 97.8 (cM) Automated name-based View Maps
Cotton - CH - 14 CIR030 Marker 47.1 (cM) Automated name-based View Maps
Cotton - T3 - 3 CIR030 Marker 85.01 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR030 Marker 12.2 (cM) Automated name-based View Maps
CIR263 Marker 60.1 Cotton - Guazuncho2xVH8-RIL - c14 CIR263a Marker 73.57 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR263 Marker 88.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR263 Marker 103.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR263 Marker 40.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR263 Marker Cotton 59,508,047 - 59,508,340 (bp) Automated name-based View Maps
Cotton - GVc - 3 CIR263 Marker 80.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR263 Marker 42.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 CIR263 Marker 54.29 (cM) Automated name-based View Maps
BNL3408 Marker 56 Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3408 Marker 96.2 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3408 Marker 110.2 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
NAU3479 Marker 55 Cotton - TH - 3 NAU3479 Marker 56.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU923 Marker 111 (cM) Automated name-based View Maps