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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 4
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 140.8 cM
Features by Type:
53 Marker
53 Total

Map Features

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Items 1 to 25 of 53.       of 3 | Next
Cotton - E3 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU0751 Marker 0 Cotton - HDC - 4 HAU0751 Marker 110.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 HAU0751 Marker Cotton 34,979,841 - 34,980,611 (bp) Automated name-based View Maps
HAU3302 Marker 8.6 Cotton - HDC - 4 CLU1257 Marker 95.1 (cM) Automated name-based View Maps
CIR122 Marker 16.2 Cotton - GVc - 4 CIR122 Marker 15 (cM) Automated name-based View Maps
Cotton - HDC - 22 CIR122 Marker 88.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR122 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 4 CIR122 Marker 98 (cM) Automated name-based View Maps
Cotton - HDC - 21 CIR122 Marker 127.7 (cM) Automated name-based View Maps
Cotton - CH - 4 CIR122 Marker 29.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR122 Marker Cotton 32,909,187 - 32,909,567 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 CIR122 Marker 52.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR122b Marker 12.76 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR122 Marker 13 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR122a Marker 16.29 (cM) Automated name-based View Maps
Cotton - CH - 21 CIR122 Marker 109.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 CIR122 Marker 79.4 (cM) Automated name-based View Maps
NAU5236 Marker 18.6 Cotton - TH - 4 NAU5236 Marker 113.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU5236 Marker Cotton 35,214,411 - 35,215,335 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU5236 Marker 87.7 (cM) Automated name-based View Maps
HAU1895 Marker 22.2 Cotton - HDC - 4 CLU1257 Marker 95.1 (cM) Automated name-based View Maps
MUSB1112 Marker 32.1 Cotton - HDC - 4 MUSB1112 Marker 88.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUSB1112 Marker Cotton 33,407,659 - 33,408,795 (bp) Automated name-based View Maps
Cotton - T3 - 22 MUSB1112 Marker 93.03 (cM) Automated name-based View Maps
Cotton - E3 - 22 MUSB1112 Marker 42 (cM) Automated name-based View Maps
Cotton - HDC - 22 MUSB1112 Marker 88.2 (cM) Automated name-based View Maps
NAU3868 Marker 38.9 Cotton - HDC - 4 NAU3868 Marker 83.4 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU3868 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU3868 Marker 21.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU3868 Marker 85.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3868 Marker Cotton 33,338,349 - 33,339,264 (bp) Automated name-based View Maps
Cotton - E3 - 22 NAU3868 Marker 44.2 (cM) Automated name-based View Maps
HAU0101 Marker 47.6 Cotton - Graimondii_physical - Gr_Chr12 HAU0101 Marker Cotton 32,705,769 - 32,706,433 (bp) Automated name-based View Maps
Cotton - HDC - 4 HAU0101 Marker 77.3 (cM) Automated name-based View Maps
HAU0036 Marker 51.4 Cotton - HDC - 4 HAU0036 Marker 74.6 (cM) Automated name-based View Maps
HAU0086 Marker 53.8 Cotton - Graimondii_physical - Gr_Chr12 HAU0086 Marker Cotton 32,303,880 - 32,304,574 (bp) Automated name-based View Maps
Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
Cotton - T3 - 4 HAU0086 Marker 75.53 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 HAU0086 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 22 HAU0086 Marker 77.3 (cM) Automated name-based View Maps
Cotton - E3 - 22 HAU0086 Marker 60 (cM) Automated name-based View Maps
Cotton - T3 - 22 HAU0086 Marker 82.07 (cM) Automated name-based View Maps
DPL0451 Marker 55.6 Cotton - Graimondii_physical - Gr_Chr12 DPL0451 Marker Cotton 32,368,710 - 32,369,498 (bp) Automated name-based View Maps
Cotton - T3 - 4 DPL0451 Marker 77.77 (cM) Automated name-based View Maps
Cotton - HDC - 4 DPL0451 Marker 75.1 (cM) Automated name-based View Maps
DPL0494 Marker 59.7 Cotton - Graimondii_physical - Gr_Chr12 DPL0494 Marker Cotton 32,148,417 - 32,148,936 (bp) Automated name-based View Maps
Cotton - T3 - 4 DPL0494 Marker 73.47 (cM) Automated name-based View Maps
Cotton - HDC - 4 DPL0494 Marker 71.3 (cM) Automated name-based View Maps
TMB2483 Marker 60.5 Cotton - T3 - 9 TMB2483 Marker 70.73 (cM) Automated name-based View Maps
Cotton - HDC - 9 TMB2483 Marker 78.7 (cM) Automated name-based View Maps
Cotton - E3 - 9 TMB2483 Marker 105.6 (cM) Automated name-based View Maps
Cotton - HDC - 4 TMB2483 Marker 70.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 TMB2483 Marker Cotton 40,189,064 - 40,189,591 (bp) Automated name-based View Maps
HAU2016 Marker 61.8 Cotton - HDC - 4 HAU2016 Marker 68.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 HAU2016 Marker Cotton 31,554,045 - 31,554,833 (bp) Automated name-based View Maps
NAU3093 Marker 62.8 Cotton - Graimondii_physical - Gr_Chr12 NAU3093 Marker Cotton 31,372,826 - 31,373,633 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3093 Marker 65.3 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU3093 Marker 74.4 (cM) Automated name-based View Maps
NAU3791 Marker 62.8 Cotton - E3 - 22 NAU3791 Marker 30.1 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU3791 Marker 110.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU3791 Marker Cotton 34,539,101 - 34,539,850 (bp) Automated name-based View Maps
Cotton - HDC - 4 NAU3791 Marker 86.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU3791 Marker 98.3 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU3791 Marker 108.5 (cM) Automated name-based View Maps
JESPR223 Marker 63.2 Cotton - T3 - 4 JESPR223 Marker 67.88 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU140 Marker 66.9 (cM) Automated name-based View Maps
NAU3777 Marker 64.1 Cotton - HDC - 22 CLU864 Marker 108.2 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU3777 Marker 29.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU864 Marker 96.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU864 Marker 66.3 (cM) Automated name-based View Maps
Gh117 Marker 68.1 Cotton - HDC - 4 Gh117 Marker 64.1 (cM) Automated name-based View Maps
Cotton - T3 - 4 Gh117 Marker 64.39 (cM) Automated name-based View Maps
NAU2363 Marker 69.7 Cotton - TH - 4 NAU2363 Marker 30.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 60.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU2363 Marker 37.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2363 Marker 65.6 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU2363 Marker 66 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2363 Marker 63.9 (cM) Automated name-based View Maps
MUSB1050 Marker 70.6 Cotton - HDC - 22 MUSB1050 Marker 55.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 MUSB1050 Marker 53.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUSB1050 Marker Cotton 24,591,110 - 24,591,851 (bp) Automated name-based View Maps
Cotton - T3 - 4 MUSB1050 Marker 53.19 (cM) Automated name-based View Maps
Cotton - T3 - 22 MUSB1050 Marker 62.4 (cM) Automated name-based View Maps
Cotton - E3 - 22 MUSB1050 Marker 82 (cM) Automated name-based View Maps
DPL0667 Marker 72.1 Cotton - Graimondii_physical - Gr_Chr01 DPL0667 Marker Cotton 46,622,560 - 46,623,085 (bp) Automated name-based View Maps
Cotton - HDC - 4 DPL0667 Marker 58.9 (cM) Automated name-based View Maps
Cotton - T3 - 4 DPL0667 Marker 58.43 (cM) Automated name-based View Maps
BNL0530 Marker 72.3 Cotton - T3 - 4 BNL0530 Marker 61.45 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL0530 Marker 30.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL0530 Marker 64.9 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL0530 Marker 61.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL530 Marker 74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL530 Marker 18 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0530 Marker 50.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL0530 Marker Cotton 28,958,470 - 28,958,747 (bp) Automated name-based View Maps
Cotton - TH - 4 BNL0530 Marker 68.8 (cM) Automated name-based View Maps
NAU2654 Marker 73.9 Cotton - HDC - 4 NAU2654 Marker 56.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU2654 Marker Cotton 27,666,100 - 27,666,940 (bp) Automated name-based View Maps
Cotton - TH - 4 NAU2654 Marker 60.5 (cM) Automated name-based View Maps
NAU6672 Marker 73.9 Cotton - TH - 4 NAU6672 Marker 59.4 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU6672 Marker 135 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU6672 Marker 56.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU6672 Marker 61.7 (cM) Automated name-based View Maps