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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 6
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 6
Map Start: 0 cM
Map Stop: 172.1 cM
Features by Type:
78 Marker
78 Total

Map Features

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Items 1 to 25 of 78.       of 4 | Next
Cotton - E3 - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU5434 Marker 98.8 Cotton - TH - 6 NAU5434 Marker 57 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU4928 Marker 85.6 (cM) Automated name-based View Maps
HAU2119 Marker 100.1 Cotton - Graimondii_physical - Gr_Chr10 HAU2119 Marker Cotton 50,623,714 - 50,624,954 (bp) Automated name-based View Maps
Cotton - HDC - 6 HAU2119 Marker 85.1 (cM) Automated name-based View Maps
JESPR194 Marker 101.1 Cotton - HDC - 6 JESPR194 Marker 86.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 JESPR194 Marker Cotton 53,566,772 - 53,567,169 (bp) Automated name-based View Maps
Cotton - TH - 6 JESPR194 Marker 58.6 (cM) Automated name-based View Maps
HAU0210 Marker 101.4 Cotton - HDC - 6 HAU0210 Marker 84.4 (cM) Automated name-based View Maps
NAU3803 Marker 103.5 Cotton - HDC - 6 NAU3803 Marker 83.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU3803 Marker Cotton 54,869,082 - 54,869,847 (bp) Automated name-based View Maps
NAU2968 Marker 103.7 Cotton - TH - 6 NAU2968 Marker 52.9 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU2968 Marker 83.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU2968 Marker Cotton 54,349,864 - 54,350,661 (bp) Automated name-based View Maps
BNL3650 Marker 105.2 Cotton - HDC - 6 BNL3650 Marker 77.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3650 Marker 43.66 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL3650 Marker 145.8 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL3650 Marker 103.6 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL3650 Marker 71.9 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL3650 Marker 42.3 (cM) Automated name-based View Maps
NAU4946 Marker 109 Cotton - HDC - 6 NAU4946 Marker 81.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU4946 Marker Cotton 55,627,397 - 55,627,926 (bp) Automated name-based View Maps
Cotton - TH - 6 NAU4946 Marker 50.7 (cM) Automated name-based View Maps
NAU3365 Marker 112.7 Cotton - Guazuncho2xVH8-RIL - c9 NAU3365 Marker 51.48 (cM) Automated name-based View Maps
Cotton - HDC - 9 NAU3365 Marker 97.7 (cM) Automated name-based View Maps
Cotton - TH - 9 NAU3365 Marker 100.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU3365 Marker 71 (cM) Automated name-based View Maps
Cotton - E3 - 1 NAU3365 Marker 28 (cM) Automated name-based View Maps
Cotton - GVc - 9 NAU3365 Marker 87.8 (cM) Automated name-based View Maps
BNL2884 Marker 113.2 Cotton - Guazuncho2xVH8-RIL - c6 BNL2884 Marker 35.92 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL2884 Marker Cotton 57,271,338 - 57,271,690 (bp) Automated name-based View Maps
Cotton - TH - 6 BNL2884 Marker 41.6 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL2884 Marker 117.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL2884 Marker 198.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL2884 Marker 70.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL2884 Marker 78.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c6 BNL2884 Marker 80.1 (cM) Automated name-based View Maps
DPL0665 Marker 117.6 Cotton - E3 - 26 DPL0665 Marker 29.8 (cM) Automated name-based View Maps
Cotton - HDC - 26 DPL0665 Marker 60 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0665 Marker Cotton 23,210,845 - 23,211,520 (bp) Automated name-based View Maps
Cotton - T3 - 26 DPL0665 Marker 28.45 (cM) Automated name-based View Maps
TMB1922 Marker 121.3 Cotton - Graimondii_physical - Gr_Chr10 TMB1922 Marker Cotton 46,406,443 - 46,406,870 (bp) Automated name-based View Maps
Cotton - HDC - 6 TMB1922 Marker 66.2 (cM) Automated name-based View Maps
GhCFE Marker 123.1 Cotton - TH - 18 GhCFE Marker 32.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 GhCFE Marker 65.3 (cM) Automated name-based View Maps
HAU1143 Marker 128.1 Cotton - HDC - 6 CLU926 Marker 62.8 (cM) Automated name-based View Maps
Gh185 Marker 129.8 Cotton - Graimondii_physical - Gr_Chr10 Gh185 Marker Cotton 59,320,451 - 59,320,909 (bp) Automated name-based View Maps
Cotton - HDC - 6 Gh185 Marker 56.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 Gh185 Marker 22.7 (cM) Automated name-based View Maps
NAU3206 Marker 137.4 Cotton - HDC - 6 NAU3206 Marker 66.7 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU3206 Marker 36.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU3206 Marker Cotton 58,813,568 - 58,814,414 (bp) Automated name-based View Maps
NAU3677 Marker 149.4 Cotton - TH - 25 NAU3677 Marker 6.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU3677 Marker 51.9 (cM) Automated name-based View Maps
Cotton - E3 - 25 NAU3677 Marker 135.9 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU3677 Marker 36.6 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU3677 Marker 15.2 (cM) Automated name-based View Maps
HAU0504 Marker 150.9 Cotton - HDC - 6 CLU594 Marker 51 (cM) Automated name-based View Maps
BNL2823 Marker 153.5 Cotton - HDC - 6 BNL2823 Marker 49.5 (cM) Automated name-based View Maps
CIR128 Marker 154.9 Cotton - Graimondii_physical - Gr_Chr10 CIR128 Marker Cotton 60,957,975 - 60,958,156 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 CIR128a Marker 48.87 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR128 Marker 48.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR128 Marker 273.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR128 Marker 273.2 (cM) Automated name-based View Maps
HAU1056 Marker 157.1 Cotton - HDC - 6 CLU877 Marker 47.4 (cM) Automated name-based View Maps
Cotton - E3 - 4 HAU1056 Marker 87.7 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU877 Marker 46.1 (cM) Automated name-based View Maps
NAU2773 Marker 160.3 Cotton - HDC - 25 NAU2773 Marker 23.3 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU2773 Marker 6.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU2773 Marker 45.6 (cM) Automated name-based View Maps
Cotton - E3 - 25 NAU2773 Marker 143.6 (cM) Automated name-based View Maps
Gh513 Marker 168.5 Cotton - HDC - 6 Gh513 Marker 42.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gh513 Marker Cotton 61,564,356 - 61,564,798 (bp) Automated name-based View Maps
NAU3427 Marker 172.1 Cotton - HDC - 6 NAU3427 Marker 40.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU3427 Marker Cotton 61,681,589 - 61,682,248 (bp) Automated name-based View Maps
Cotton - TH - 6 NAU3427 Marker 0 (cM) Automated name-based View Maps
STV106 Marker 0 Cotton - HDC - 6 CLU3901 Marker 146.5 (cM) Automated name-based View Maps
Cotton - T3 - 6 STV106 Marker 124.53 (cM) Automated name-based View Maps