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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-E3
(Reference Set)
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Correspondences
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Maps 8
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - E3 [ View Map Set Info ]
Map Name: 8
Map Start: 0 cM
Map Stop: 142 cM
Features by Type:
86 Marker
86 Total

Map Features

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Items 1 to 25 of 86.       of 4 | Next
Cotton - E3 - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
HAU1782 Marker 0 Cotton - HDC - 18 CLU1207 Marker 101.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU1207 Marker 137.4 (cM) Automated name-based View Maps
HAU2583 Marker 1.7 Cotton - HDC - 8 CLU1601 Marker 131.1 (cM) Automated name-based View Maps
HAU2583 Marker 6.5 Cotton - HDC - 8 CLU1601 Marker 131.1 (cM) Automated name-based View Maps
HAU1390 Marker 10.7 Cotton - Graimondii_physical - Gr_Chr04 HAU1390 Marker Cotton 7,144,676 - 7,145,562 (bp) Automated name-based View Maps
Cotton - HDC - 8 HAU1390 Marker 127 (cM) Automated name-based View Maps
JESPR230 Marker 13.2 Cotton - CH - 22 JESPR230 Marker 69.2 (cM) Automated name-based View Maps
Cotton - GVc - 9 JESPR230 Marker 53.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR230 Marker 64.3 (cM) Automated name-based View Maps
Cotton - GVc - 19 JESPR230 Marker 81.7 (cM) Automated name-based View Maps
Cotton - GVc - 8 JESPR230 Marker 149 (cM) Automated name-based View Maps
Cotton - HDC - 19 JESPR230 Marker 110.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 JESPR230c Marker 32.76 (cM) Automated name-based View Maps
Cotton - T3 - 22 JESPR230 Marker 59.02 (cM) Automated name-based View Maps
Cotton - GVc - 22 JESPR230 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 JESPR230 Marker 76.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 JESPR230 Marker 206.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 JESPR230a Marker 45.87 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 JESPR230 Marker 95.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR230 Marker 48.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 JESPR230 Marker 139.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 JESPR230 Marker 124.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 JESPR230 Marker Cotton 65,201,299 - 65,201,874 (bp) Automated name-based View Maps
BNL3627 Marker 15.3 Cotton - TH - 8 BNL3627 Marker 85.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3627 Marker 130.6 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3627 Marker 99.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL3627c Marker 36.06 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3627a Marker 82.32 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3627 Marker Cotton 4,069,298 - 4,069,687 (bp) Automated name-based View Maps
Cotton - CH - 24 BNL3627 Marker 145.2 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3627 Marker 120.1 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3627 Marker 37.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3627 Marker 41 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3627 Marker 148.9 (cM) Automated name-based View Maps
Cotton - PK - A02 BNL3627 Marker 128.3 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3627 Marker 78.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D03 BNL3627 Marker 66.7 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3627 Marker 36.72 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3627 Marker 136.5 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3627 Marker 109.7 (cM) Automated name-based View Maps
HAU1308 Marker 15.7 Cotton - HDC - 8 HAU1308 Marker 119.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 HAU1308 Marker Cotton 3,217,980 - 3,219,394 (bp) Automated name-based View Maps
CIR343 Marker 16.3 Cotton - GVc - 8 CIR343 Marker 158.5 (cM) Automated name-based View Maps
Cotton - GVc - 24 CIR343 Marker 102 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 CIR343 Marker 138.1 (cM) Automated name-based View Maps
Cotton - TH - 8 CIR343 Marker 91 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 CIR343a Marker 83.07 (cM) Automated name-based View Maps
Cotton - T3 - 8 CIR343 Marker 26.01 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 CIR343 Marker 214.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 CIR343 Marker 133.3 (cM) Automated name-based View Maps
Cotton - CH - 8 CIR343 Marker 152.9 (cM) Automated name-based View Maps
Cotton - HDC - 8 CIR343 Marker 133.6 (cM) Automated name-based View Maps
NAU2293 Marker 17.9 Cotton - HDC - 8 CLU3834 Marker 125.2 (cM) Automated name-based View Maps
Cotton - T3 - 8 NAU2293 Marker 32.68 (cM) Automated name-based View Maps
HAU1749 Marker 22.4 Cotton - Graimondii_physical - Gr_Chr04 HAU1749 Marker Cotton 12,218,536 - 12,219,411 (bp) Automated name-based View Maps
Cotton - HDC - 8 HAU1749 Marker 114.1 (cM) Automated name-based View Maps
HAU1547 Marker 25 Cotton - HDC - 8 HAU1547 Marker 111.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 HAU1547 Marker Cotton 22,056,642 - 22,057,307 (bp) Automated name-based View Maps
NAU3769 Marker 27.2 Cotton - HDC - 24 NAU3769 Marker 104 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3769 Marker 95.2 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU3769 Marker 93.9 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3769 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3769 Marker Cotton 8,199,479 - 8,200,303 (bp) Automated name-based View Maps
BNL2527 Marker 28.9 Cotton - HDC - 22 BNL2527 Marker 68.4 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL2527 Marker 65.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL2527 Marker 108.6 (cM) Automated name-based View Maps
TMB1717 Marker 30.1 Cotton - HDC - 8 TMB1717 Marker 107.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB1717 Marker Cotton 6,766,377 - 6,766,867 (bp) Automated name-based View Maps
NAU3324 Marker 30.6 Cotton - E3 - 24 NAU3324 Marker 68.9 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3324 Marker 119.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3324 Marker 148.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3324 Marker 174.9 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU3324 Marker 140.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3324 Marker Cotton 1,245,133 - 1,245,800 (bp) Automated name-based View Maps
CM43 Marker 31.1 Cotton - T3 - 24 CM43 Marker 19.18 (cM) Automated name-based View Maps
Cotton - HDC - 8 CM43 Marker 106.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 CM43 Marker 110.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CM43 Marker Cotton 9,164,152 - 9,164,478 (bp) Automated name-based View Maps
Cotton - T3 - 8 CM43 Marker 49.79 (cM) Automated name-based View Maps
CS101 Marker 31.9 Cotton - HDC - 8 CS101 Marker 106.5 (cM) Automated name-based View Maps
TMB0029 Marker 33.7 Cotton - HDC - 8 TMB0029 Marker 105.8 (cM) Automated name-based View Maps
Cotton - HDC - 18 TMB0029 Marker 65.5 (cM) Automated name-based View Maps
Cotton - E3 - 18 TMB0029 Marker 76.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 TMB0029 Marker Cotton 41,584,904 - 41,585,349 (bp) Automated name-based View Maps
MUSS136 Marker 34.3 Cotton - HDC - 8 CLU3257 Marker 105.6 (cM) Automated name-based View Maps
DPL0030 Marker 34.7 Cotton - T3 - 8 DPL0030 Marker 55.05 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU172 Marker 103.6 (cM) Automated name-based View Maps
HAU1632 Marker 35.2 Cotton - HDC - 8 HAU1632 Marker 105.3 (cM) Automated name-based View Maps
MUSB0662 Marker 35.7 Cotton - Graimondii_physical - Gr_Chr04 MUSB0662 Marker Cotton 31,338,419 - 31,339,465 (bp) Automated name-based View Maps
Cotton - T3 - 8 MUSB0662 Marker 58.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0662 Marker 101.9 (cM) Automated name-based View Maps
HAU0672 Marker 36.4 Cotton - E3 - 1 HAU0672 Marker 32.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 HAU0672 Marker Cotton 60,956,414 - 60,957,595 (bp) Automated name-based View Maps
Cotton - HDC - 8 HAU0672 Marker 104.9 (cM) Automated name-based View Maps
NAU3207 Marker 37.3 Cotton - HDC - 8 CLU2116 Marker 94.5 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU3207 Marker 91.2 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3207 Marker 30.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU2116 Marker 103.7 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU3207 Marker 71.7 (cM) Automated name-based View Maps
HAU2086 Marker 37.9 Cotton - HDC - 24 CLU1339 Marker 94.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 CLU1339 Marker 104.6 (cM) Automated name-based View Maps
Cotton - E3 - 24 HAU2086 Marker 36.3 (cM) Automated name-based View Maps