CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-GVc
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 12
Map Start: 0 cM
Map Stop: 134.9 cM
Features by Type:
89 Marker
6 QTL
95 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 95.       of 4 | Next
Cotton - GVc - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR133 Marker 103.6 Cotton - Graimondii_physical - Gr_Chr05 CIR133 Marker Cotton 62,794,705 - 62,795,053 (bp) Automated name-based View Maps
Cotton - HDC - 12 CIR133 Marker 45.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR133 Marker 16.4 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR133 Marker 107.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 CIR133 Marker 70.77 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR133 Marker 157.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR133 Marker 143.4 (cM) Automated name-based View Maps
Cotton - CH - 3 CIR133 Marker 93.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 CIR133b Marker 56.68 (cM) Automated name-based View Maps
E4M1_280 Marker 104 Cotton - Guazuncho2xVH8-BC1 - c12 E4M1_280 Marker 142.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 E4M1_280 Marker 45.5 (cM) Automated name-based View Maps
E8M5_250 Marker 104.3 Cotton - HDC - 12 E8M5_250 Marker 45.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E8M5_250 Marker 142.6 (cM) Automated name-based View Maps
E2M6_138 Marker 104.6 Cotton - HDC - 12 E2M6_138 Marker 45.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 E2M6_138 Marker 108.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E2M6_138 Marker 142.6 (cM) Automated name-based View Maps
E7M7_152 Marker 105 Cotton - Guazuncho2xVH8-BC1 - c12 E7M7_152 Marker 142.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 E7M7_152 Marker 46 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 E7M7_152 Marker 108.7 (cM) Automated name-based View Maps
E6M6_360 Marker 105.9 Cotton - Guazuncho2xVH8-BC2 - c12 E6M6_360 Marker 108.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E6M6_360 Marker 142.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 E6M6_360 Marker 45.6 (cM) Automated name-based View Maps
CG07 Marker 107 Cotton - Guazuncho2xVH8-BC1 - c12 CG07 Marker 143.8 (cM) Automated name-based View Maps
Cotton - HDC - 12 CG07 Marker 45 (cM) Automated name-based View Maps
BNL0193 Marker 107.8 Cotton - Graimondii_physical - Gr_Chr13 BNL0193 Marker Cotton 2,517,246 - 2,517,541 (bp) Automated name-based View Maps
Cotton - E3 - 18 BNL0193 Marker 115.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c18 BNL193 Marker 87.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL0193 Marker 99.65 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL0193 Marker 25.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL0193 Marker 119.9 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL0193 Marker 10.2 (cM) Automated name-based View Maps
Cotton - T3 - 18 BNL0193 Marker 19 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0193 Marker 44.7 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL0193 Marker 101.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL193 Marker 143.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL0193u Marker 60.74 (cM) Automated name-based View Maps
E3M8_165 Marker 108.3 Cotton - HDC - 12 E3M8_165 Marker 44.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E3M8_165 Marker 142.6 (cM) Automated name-based View Maps
E5M5_395 Marker 109.1 Cotton - Guazuncho2xVH8-BC1 - c12 E5M5_395 Marker 142.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 E5M5_395 Marker 108.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 E5M5_395 Marker 44.3 (cM) Automated name-based View Maps
BNL3599 Marker 110.1 Cotton - HDC - 26 BNL3599 Marker 62 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3599 Marker 43.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL3599 Marker 153.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3599 Marker 137 (cM) Automated name-based View Maps
Cotton - E3 - 12 BNL3599 Marker 57.8 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3599 Marker 82.2 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL3599 Marker 25.88 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3599 Marker 165.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 BNL3599a Marker 56.74 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3599b Marker 62.34 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL3599 Marker 129.4 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL3599 Marker 56.6 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL3599 Marker 46.61 (cM) Automated name-based View Maps
E1M3_252 Marker 111.4 Cotton - Guazuncho2xVH8-BC2 - c12 E1M3_252 Marker 107.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 E1M3_252 Marker 41.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E1M3_252 Marker 125.1 (cM) Automated name-based View Maps
JESPR270 Marker 111.6 Cotton - TH - 12 JESPR270 Marker 58.8 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU132 Marker 55.3 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR270 Marker 61.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR270 Marker 132.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR270 Marker 78.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU132 Marker 40.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 JESPR270c Marker 64.22 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR270 Marker 88.2 (cM) Automated name-based View Maps
Cotton - E3 - 12 JESPR270 Marker 56.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU132 Marker 79.5 (cM) Automated name-based View Maps
MUSS026 Marker 112.2 Cotton - T3 - 12 MUSS026 Marker 39.67 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 MUSS026 Marker Cotton 8,084,596 - 8,085,057 (bp) Automated name-based View Maps
Cotton - HDC - 12 MUSS026 Marker 38.9 (cM) Automated name-based View Maps
Cotton - E3 - 12 MUSS026 Marker 56.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSS026 Marker 64.79 (cM) Automated name-based View Maps
E7M5_270 Marker 112.8 Cotton - Guazuncho2xVH8-BC1 - c12 E7M5_270 Marker 153.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 E7M5_270 Marker 38.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 E7M5_270 Marker 123.9 (cM) Automated name-based View Maps
BNL2621 Marker 114.1 Cotton - HDC - 26 BNL2621 Marker 50.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL2621 Marker 37.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL2621v Marker 66.57 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL2621 Marker 153.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL2621 Marker Cotton 6,883,854 - 6,884,405 (bp) Automated name-based View Maps
Cotton - E3 - 12 BNL2621 Marker 51.8 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL2621 Marker 18.91 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL2621 Marker 38.7 (cM) Automated name-based View Maps
E43M4-M193.2 Marker 115.2 Cotton - HDC - 12 E43M4-M193.2 Marker 37 (cM) Automated name-based View Maps
E42M2-M309.2 Marker 116.4 Cotton - HDC - 12 E42M2-M309.2 Marker 36 (cM) Automated name-based View Maps
BNL3261 Marker 119.5 Cotton - T3 - 12 BNL3261 Marker 34.36 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL3261 Marker 40.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3261 Marker 70.55 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL3261 Marker 173.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3261b Marker 36.33 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3261 Marker 33.2 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL3261 Marker 176 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3261 Marker 54.6 (cM) Automated name-based View Maps
CIR042 Marker 0 Cotton - T3 - 12 CIR042 Marker 119 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 CIR042 Marker 3.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 CIR042 Marker 111.2 (cM) Automated name-based View Maps
MUSB1117 Marker 123.3 Cotton - HDC - 12 MUSB1117 Marker 28.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSB1117 Marker 75.38 (cM) Automated name-based View Maps
Cotton - T3 - 12 MUSB1117 Marker 28.68 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 MUSB1117 Marker Cotton 3,599,177 - 3,600,050 (bp) Automated name-based View Maps
JESPR300 Marker 2.7 Cotton - T3 - 26 JESPR300 Marker 109.91 (cM) Automated name-based View Maps
Cotton - TH - 26 JESPR300 Marker 123.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 JESPR300a Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR300 Marker 1.5 (cM) Automated name-based View Maps
Cotton - T3 - 12 JESPR300 Marker 120.31 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU2020 Marker 142.2 (cM) Automated name-based View Maps
Cotton - TH - 12 JESPR300 Marker 149.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR300 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 JESPR300b Marker 1.13 (cM) Automated name-based View Maps
Cotton - E3 - 12 JESPR300 Marker 210 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU2020 Marker 112.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 JESPR300 Marker 5.2 (cM) Automated name-based View Maps
E4M5_500 Marker 126.8 Cotton - HDC - 12 E4M5_500 Marker 25.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 E4M5_500 Marker 172.3 (cM) Automated name-based View Maps
A1614 Marker 3.1 Cotton - Graimondii_physical - Gr_Chr08 A1614 Marker Cotton 56,633,976 - 56,635,054 (bp) Automated name-based View Maps
Cotton - HDC - 12 A1614 Marker 113.3 (cM) Automated name-based View Maps
Cotton - PK - c12 A1614 Marker 1.8 (cM) Automated name-based View Maps
Cotton - HDC - 26 A1614 Marker 147.8 (cM) Automated name-based View Maps
Cotton - PK - c26 A1614 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 A1614 Marker 0.02 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 A1614 Marker 3.9 (cM) Automated name-based View Maps
E6M5_103 Marker 134.9 Cotton - Guazuncho2xVH8-BC1 - c12 E6M5_103 Marker 189.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 E6M5_103 Marker 17.1 (cM) Automated name-based View Maps