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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-GVc
(Reference Set)
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Correspondences
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Maps 1
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 1
Map Start: 0 cM
Map Stop: 128.3 cM
Features by Type:
50 Marker
50 Total

Map Features

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Items 1 to 25 of 50.       of 2 | Next
Cotton - GVc - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR055 Marker 56.1 Cotton - HDC - 10 CIR055 Marker 74.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR055 Marker 102.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 CIR055 Marker 67.3 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU46 Marker 56.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU46 Marker 46.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR055b Marker 30.17 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 CIR055 Marker 46.78 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR055 Marker 91.7 (cM) Automated name-based View Maps
E2M7_500 Marker 58.9 Cotton - Guazuncho2xVH8-BC1 - c1 E2M7_500 Marker 136.3 (cM) Automated name-based View Maps
Cotton - HDC - 1 E2M7_500 Marker 68.1 (cM) Automated name-based View Maps
CG08 Marker 61.7 Cotton - Guazuncho2xVH8-BC1 - c1 CG08 Marker 148 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CG08 Marker 4 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG08 Marker 68.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CG08 Marker 148 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG08 Marker 68.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 CG08 Marker 97.7 (cM) Automated name-based View Maps
Cotton - GVc - 17 CG08 Marker 4.3 (cM) Automated name-based View Maps
CG08 Marker 63.3 Cotton - HDC - 17 CG08 Marker 97.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG08 Marker 68.8 (cM) Automated name-based View Maps
Cotton - GVc - 17 CG08 Marker 4.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CG08 Marker 4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CG08 Marker 148 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CG08 Marker 148 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG08 Marker 68.4 (cM) Automated name-based View Maps
BNL1350 Marker 66.9 Cotton - Guazuncho2xVH8-BC1 - c15 BNL1350 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL1350a Marker 62.52 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL1350 Marker 70.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL1350b Marker 42.84 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL1350 Marker 82.7 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL1350 Marker 58.61 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL1350 Marker 27 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL1350 Marker 57.33 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL1350 Marker 62.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL1350 Marker 154.1 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL1350 Marker 96.6 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL1350 Marker 77.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL1350 Marker 69.9 (cM) Automated name-based View Maps
A1686 Marker 67.9 Cotton - PK - c15 A1686 Marker 78.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1686 Marker 155.5 (cM) Automated name-based View Maps
Cotton - HDC - 1 A1686 Marker 70.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 A1686 Marker 84.4 (cM) Automated name-based View Maps
Cotton - PK - c1 A1686 Marker 97.3 (cM) Automated name-based View Maps
E43M53-M234.9 Marker 68.5 Cotton - HDC - 1 E43M53-M234.9 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 E43M53-M234.9 Marker 54.3 (cM) Automated name-based View Maps
E3M54-M350.2 Marker 69.6 Cotton - HDC - 1 E3M54-M350.2 Marker 72 (cM) Automated name-based View Maps
MUSB0958 Marker 70.8 Cotton - HDC - 1 MUSB0958 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0958 Marker 63.1 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0958 Marker 53.27 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0958 Marker 47.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0958a Marker 37.63 (cM) Automated name-based View Maps
Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0958d Marker 39.08 (cM) Automated name-based View Maps
Cotton - HDC - 9 MUSB0958 Marker 46.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0958 Marker 108.6 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSB0958 Marker 110.44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MUSB0958b Marker 56.75 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0958g Marker 46.62 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
Cotton - HDC - 10 MUSB0958 Marker 107.4 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MUSB0958e Marker 25.11 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB0958 Marker 3.9 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0958 Marker 58.8 (cM) Automated name-based View Maps
MGHES10 Marker 70.9 Cotton - CH - 15 MGHES10 Marker 95 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU1355 Marker 61 (cM) Automated name-based View Maps
Cotton - T3 - 15 MGHES10 Marker 64.22 (cM) Automated name-based View Maps
Cotton - CH - 1 MGHES10 Marker 77.6 (cM) Automated name-based View Maps
Cotton - T3 - 1 MGHES10 Marker 62.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MGHES10b Marker 56.88 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU1355 Marker 80.5 (cM) Automated name-based View Maps
Cotton - E3 - 1 MGHES10 Marker 37.8 (cM) Automated name-based View Maps
Cotton - GVc - 15 MGHES10 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 MGHES10a Marker 39.66 (cM) Automated name-based View Maps
MUSS422 Marker 71 Cotton - Guazuncho2xVH8-RIL - c15 MUSS422a Marker 39.45 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MUSS422b Marker 56.96 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU2744 Marker 80.3 (cM) Automated name-based View Maps
Cotton - E3 - 1 MUSS422 Marker 36.4 (cM) Automated name-based View Maps
Cotton - E3 - 15 MUSS422 Marker 74.6 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSS422 Marker 62.27 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU2744 Marker 73.2 (cM) Automated name-based View Maps
Cotton - T3 - 15 MUSS422 Marker 64.41 (cM) Automated name-based View Maps
Cotton - GVc - 15 MUSS422 Marker 68.9 (cM) Automated name-based View Maps
pAR099 Marker 71 Cotton - HDC - 1 pAR099 Marker 73 (cM) Automated name-based View Maps
Cotton - PK - c15 PAR099 Marker 148.9 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU5488 Marker 128.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 pAR099 Marker 194.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR099 Marker 130.4 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU5488 Marker 222.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pAR099 Marker 158.3 (cM) Automated name-based View Maps
Cotton - PK - D02 pAR099 Marker 51.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 CLU5488 Marker 68.1 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU5488 Marker 86.2 (cM) Automated name-based View Maps
E1M3-M73.6 Marker 71.7 Cotton - HDC - 1 E1M3-M73.6 Marker 73.5 (cM) Automated name-based View Maps
E43M2-M157.1 Marker 72.1 Cotton - HDC - 1 E43M2-M157.1 Marker 73.7 (cM) Automated name-based View Maps
CIR089 Marker 72.5 Cotton - HDC - 1 CIR089 Marker 85.2 (cM) Automated name-based View Maps
Cotton - T3 - 1 CIR089 Marker 44.22 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CIR089 Marker 159.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 CIR089 Marker Cotton 16,149,816 - 16,150,000 (bp) Automated name-based View Maps
E43M3-M-512.1 Marker 73.9 Cotton - HDC - 1 E43M3-M-512.1 Marker 75.3 (cM) Automated name-based View Maps
CG09 Marker 74.1 Cotton - Guazuncho2xVH8-BC1 - c18 CG09 Marker 63.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG09 Marker 111.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 CG09 Marker 75.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CG09 Marker 159.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CG09 Marker 191.9 (cM) Automated name-based View Maps
Cotton - GVc - 18 CG09 Marker 58.5 (cM) Automated name-based View Maps
Cotton - HDC - 18 CG09 Marker 63.2 (cM) Automated name-based View Maps
A1593 Marker 76.3 Cotton - Graimondii_physical - Gr_Chr02 A1593 Marker Cotton 15,292,271 - 15,293,461 (bp) Automated name-based View Maps
Cotton - HDC - 1 A1593 Marker 77.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1593 Marker 158.3 (cM) Automated name-based View Maps
Cotton - PK - c1 A1593 Marker 112 (cM) Automated name-based View Maps
BNL3090 Marker 79.4 Cotton - PK - c15 BNL3090 Marker 89.5 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 111.6 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3090 Marker 52.8 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3090 Marker 29.8 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3090 Marker 51.86 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL3090 Marker 54.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3090 Marker 80.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 90.8 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3090 Marker 47.64 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3090 Marker 87.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3090 Marker 86.1 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3090 Marker 63.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL3090 Marker 69.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL3090b Marker 47.81 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3090 Marker 47.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3090 Marker 168.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3090 Marker 115.9 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3090 Marker 105.5 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL3090 Marker 95.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3090a Marker 66.28 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL3090 Marker 79.3 (cM) Automated name-based View Maps
pGH377 Marker 79.8 Cotton - HDC - 1 pGH377 Marker 80.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 pGH377 Marker 168.7 (cM) Automated name-based View Maps
CMS09 Marker 79.8 Cotton - HDC - 1 CMS09 Marker 79.4 (cM) Automated name-based View Maps
Cotton - PK - c1 CMS09 Marker 120.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 CMS09 Marker 168.7 (cM) Automated name-based View Maps
NAU0934 Marker 83 Cotton - HDC - 5 NAU0934 Marker 5.7 (cM) Automated name-based View Maps
Cotton - HDC - 1 NAU0934 Marker 81.3 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU0934 Marker 4.98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 NAU0934c Marker 69.85 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU0934 Marker 191.24 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU0934 Marker Cotton 2,219,803 - 2,220,456 (bp) Automated name-based View Maps
Cotton - TH - 5 NAU0934 Marker 195.4 (cM) Automated name-based View Maps
E5M7_340 Marker 84.2 Cotton - HDC - 1 E5M7_340 Marker 81.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 E5M7_340 Marker 83.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 E5M7_340 Marker 164.8 (cM) Automated name-based View Maps
BNL3888 Marker 93.6 Cotton - PK - c14 BNL3888 Marker 62.1 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL3888 Marker 131.6 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3888 Marker 89.3 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3888 Marker 83.6 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3888 Marker 60.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3888 Marker 96.7 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3888 Marker 43.9 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3888 Marker 92.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3888 Marker 185.5 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3888 Marker 41.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3888 Marker 76.29 (cM) Automated name-based View Maps
A1204 Marker 96 Cotton - HDC - 1 A1204 Marker 89.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1204 Marker 183.8 (cM) Automated name-based View Maps
Cotton - PK - c1 A1204 Marker 145.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1204 Marker Cotton 10,735,786 - 10,736,302 (bp) Automated name-based View Maps
Cotton - PK - c1 A1204 Marker 131.6 (cM) Automated name-based View Maps
Cotton - HDC - 1 A1204 Marker 92.2 (cM) Automated name-based View Maps