CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-GVc
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 24
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 24
Map Start: 0 cM
Map Stop: 124 cM
Features by Type:
69 Marker
2 QTL
71 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 71.       of 3 | Next
Cotton - GVc - 24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
QTLClust_LEN_24_1 QTL 64.2 - 69.8 No other positions
QTLClust_LEN_24_2 QTL 74.1 - 75.1 No other positions
BNL3474 Marker 75.9 Cotton - TH - 24 BNL3474 Marker 97.7 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3474 Marker 118.8 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL3474 Marker 85 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3474 Marker 57.66 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 87.8 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3474 Marker 81.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3474 Marker 110.6 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3474 Marker 118.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 104.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3474 Marker 102.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3474 Marker Cotton 38,654,033 - 38,654,647 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3474 Marker 170.6 (cM) Automated name-based View Maps
E43M54-M169.4 Marker 75.9 Cotton - Guazuncho2xVH8-RIL - c24 E43M54-M169.4 Marker 62.23 (cM) Automated name-based View Maps
Cotton - HDC - 24 E43M54-M169.4 Marker 104.2 (cM) Automated name-based View Maps
E42M1-M134.6 Marker 76.4 Cotton - HDC - 24 E42M1-M134.6 Marker 105.2 (cM) Automated name-based View Maps
E1M4-M238.3 Marker 76.6 Cotton - HDC - 24 E1M4-M238.3 Marker 105.6 (cM) Automated name-based View Maps
BNL0387 Marker 77.1 Cotton - GVc - 8 BNL0387 Marker 118.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL0387a Marker 51.42 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL0387 Marker 128.5 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL0387 Marker 30.31 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL0387 Marker 100.1 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL0387 Marker 38.3 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL0387 Marker 55.65 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL0387 Marker 104 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL0387b Marker 61.23 (cM) Automated name-based View Maps
E6M5_350 Marker 77.4 Cotton - HDC - 24 E6M5_350 Marker 106.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D03 E6M5_350 Marker 50.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E6M5_350 Marker 113.3 (cM) Automated name-based View Maps
CIR289 Marker 77.8 Cotton - Guazuncho2xVH8-RIL - c24 CIR289 Marker 61.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CIR289 Marker Cotton 35,547,986 - 35,548,226 (bp) Automated name-based View Maps
Cotton - E3 - 24 CIR289 Marker 7.7 (cM) Automated name-based View Maps
Cotton - T3 - 24 CIR289 Marker 36.27 (cM) Automated name-based View Maps
Cotton - HDC - 24 CIR289 Marker 107.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 CIR289 Marker 128.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 CIR289 Marker 113.3 (cM) Automated name-based View Maps
MUSB0632 Marker 78.2 Cotton - T3 - 16 MUSB0632 Marker 87.09 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB0632 Marker Cotton 26,641,352 - 26,642,314 (bp) Automated name-based View Maps
Cotton - HDC - 23 MUSB0632 Marker 65.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 MUSB0632a Marker 63.61 (cM) Automated name-based View Maps
Cotton - GVc - 23 MUSB0632 Marker 42.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB0632 Marker 42.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 MUSB0632 Marker 107.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 MUSB0632b Marker 24.07 (cM) Automated name-based View Maps
BNL1017 Marker 78.5 Cotton - HDC - 24 BNL1017 Marker 108.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL1017 Marker 113.3 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL1017 Marker 119.2 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL1017 Marker 133.3 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL1017 Marker 103.1 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL1017 Marker 57.21 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL1017 Marker 170.6 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL1017 Marker 119.6 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL1017 Marker 38.1 (cM) Automated name-based View Maps
E1M2-M378.1 Marker 78.6 Cotton - HDC - 24 E1M2-M378.1 Marker 108.6 (cM) Automated name-based View Maps
E6M5_237 Marker 79.1 Cotton - Guazuncho2xVH8-BC2 - D03 E6M5_237 Marker 50.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E6M5_237 Marker 114.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 E6M5_237 Marker 109.4 (cM) Automated name-based View Maps
MUSB0641 Marker 79.2 Cotton - Guazuncho2xVH8-RIL - c25 MUSB0641m Marker 38.2 (cM) Automated name-based View Maps
Cotton - T3 - 21 MUSB0641 Marker 85.65 (cM) Automated name-based View Maps
Cotton - HDC - 3 MUSB0641 Marker 78.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 MUSB0641 Marker 109.7 (cM) Automated name-based View Maps
Cotton - GVc - 22 MUSB0641 Marker 58.6 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSB0641 Marker 107.86 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 MUSB0641n Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 MUSB0641c Marker 33.04 (cM) Automated name-based View Maps
Cotton - HDC - 23 MUSB0641 Marker 66.6 (cM) Automated name-based View Maps
Cotton - GVc - 3 MUSB0641 Marker 37.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB0641 Marker 145.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 MUSB0641k Marker 24.9 (cM) Automated name-based View Maps
Cotton - HDC - 25 MUSB0641 Marker 73 (cM) Automated name-based View Maps
Cotton - GVc - 17 MUSB0641 Marker 31 (cM) Automated name-based View Maps
Cotton - HDC - 17 MUSB0641 Marker 67 (cM) Automated name-based View Maps
Cotton - HDC - 19 MUSB0641 Marker 51.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 MUSB0641e Marker 54.71 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 MUSB0641 Marker Cotton 18,282,846 - 18,284,025 (bp) Automated name-based View Maps
Cotton - GVc - 11 MUSB0641 Marker 79.3 (cM) Automated name-based View Maps
Cotton - T3 - 3 MUSB0641 Marker 72.06 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 MUSB0641o Marker 52.48 (cM) Automated name-based View Maps
Cotton - GVc - 25 MUSB0641 Marker 80.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 MUSB0641h Marker 24.02 (cM) Automated name-based View Maps
Cotton - T3 - 23 MUSB0641 Marker 111.42 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 MUSB0641a Marker 44.92 (cM) Automated name-based View Maps
Cotton - GVc - 19 MUSB0641 Marker 148.6 (cM) Automated name-based View Maps
Cotton - GVc - 21 MUSB0641 Marker 72.7 (cM) Automated name-based View Maps
Cotton - GVc - 23 MUSB0641 Marker 43.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 MUSB0641g Marker 32.99 (cM) Automated name-based View Maps
Cotton - HDC - 21 MUSB0641 Marker 117.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 MUSB0641 Marker 47.6 (cM) Automated name-based View Maps
BNL3084 Marker 79.4 Cotton - Graimondii_physical - Gr_Chr04 BNL3084 Marker Cotton 28,531,890 - 28,532,488 (bp) Automated name-based View Maps
Cotton - HDC - 24 BNL3084 Marker 110.1 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL3084 Marker 90.5 (cM) Automated name-based View Maps
Cotton - T3 - 24 BNL3084 Marker 19.8 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL3084 Marker 31.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3084 Marker 114.6 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3084 Marker 98.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3084 Marker 64.19 (cM) Automated name-based View Maps
E4M7_134 Marker 80 Cotton - HDC - 24 E4M7_134 Marker 110.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D03 E4M7_134 Marker 50.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E4M7_134 Marker 114.6 (cM) Automated name-based View Maps
E4M3_94 Marker 80.7 Cotton - Guazuncho2xVH8-BC1 - D03 E4M3_94 Marker 114.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 E4M3_94 Marker 111.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D03 E4M3_94 Marker 50.1 (cM) Automated name-based View Maps
E43M2-M276.3 Marker 81.2 Cotton - HDC - 24 E43M2-M276.3 Marker 112 (cM) Automated name-based View Maps
E3M2_245 Marker 81.3 Cotton - Guazuncho2xVH8-BC1 - D03 E3M2_245 Marker 115.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 E3M2_245 Marker 112.2 (cM) Automated name-based View Maps
E31M7-M115.4 Marker 81.6 Cotton - HDC - 24 E31M7-M115.4 Marker 112.5 (cM) Automated name-based View Maps
A1662 Marker 81.9 Cotton - PK - c5 A1662 Marker 222 (cM) Automated name-based View Maps
Cotton - HDC - 5 A1662 Marker 17 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 A1662 Marker 115.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 A1662 Marker 112.9 (cM) Automated name-based View Maps
E1M2_360 Marker 82.2 Cotton - Guazuncho2xVH8-BC1 - D03 E1M2_360 Marker 115.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 E1M2_360 Marker 113.3 (cM) Automated name-based View Maps
E5M8_176 Marker 82.4 Cotton - Guazuncho2xVH8-BC2 - D03 E5M8_176 Marker 52.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 E5M8_176 Marker 113.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E5M8_176 Marker 115.9 (cM) Automated name-based View Maps
E3M7_360 Marker 82.8 Cotton - Guazuncho2xVH8-BC1 - D03 E3M7_360 Marker 116.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 E3M7_360 Marker 114 (cM) Automated name-based View Maps
E7M4_287 Marker 83.2 Cotton - Guazuncho2xVH8-BC2 - D03 E7M4_287 Marker 53.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 E7M4_287 Marker 116.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 E7M4_287 Marker 114.4 (cM) Automated name-based View Maps